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INSTALL report for peco on tokay2

This page was generated on 2020-10-17 11:57:22 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE peco PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1291/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
peco 1.0.0
Chiaowen Joyce Hsiao
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/peco
Branch: RELEASE_3_11
Last Commit: 3c16ee0
Last Changed Date: 2020-04-27 15:35:20 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: peco
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/peco_1.0.0.tar.gz && rm -rf peco.buildbin-libdir && mkdir peco.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=peco.buildbin-libdir peco_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL peco_1.0.0.zip && rm peco_1.0.0.tar.gz peco_1.0.0.zip
StartedAt: 2020-10-16 18:35:14 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:36:31 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 77.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/peco_1.0.0.tar.gz && rm -rf peco.buildbin-libdir && mkdir peco.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=peco.buildbin-libdir peco_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL peco_1.0.0.zip && rm peco_1.0.0.tar.gz peco_1.0.0.zip
###
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100 1376k  100 1376k    0     0  4327k      0 --:--:-- --:--:-- --:--:-- 4441k

install for i386

* installing *source* package 'peco' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'peco'
    finding HTML links ... done
    cellcyclegenes_whitfield2002            html  
    circ_dist                               html  
    cycle_npreg_insample                    html  
    cycle_npreg_loglik                      html  
    cycle_npreg_mstep                       html  
    cycle_npreg_outsample                   html  
    data_transform_quantile                 html  
    fit_bspline                             html  
    fit_cyclical_many                       html  
    fit_loess                               html  
    fit_trendfilter                         html  
    initialize_grids                        html  
    intensity2circle                        html  
    model_5genes_predict                    html  
    model_5genes_train                      html  
    rotation                                html  
    sce_top101genes                         html  
    shift_origin                            html  
    training_human                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'peco' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'peco' as peco_1.0.0.zip
* DONE (peco)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'peco' successfully unpacked and MD5 sums checked