Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJK[L]MNOPQRSTUVWXYZ

BUILD report for logicFS on celaya2

This page was generated on 2020-01-16 13:30:14 -0500 (Thu, 16 Jan 2020).

Package 913/1818HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
logicFS 2.7.0
Holger Schwender
Snapshot Date: 2020-01-15 16:46:30 -0500 (Wed, 15 Jan 2020)
URL: https://git.bioconductor.org/packages/logicFS
Branch: master
Last Commit: f8a3ce9
Last Changed Date: 2019-10-29 13:34:42 -0500 (Tue, 29 Oct 2019)
malbec2 Linux (Ubuntu 18.04.3 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: logicFS
Version: 2.7.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data logicFS
StartedAt: 2020-01-15 19:56:54 -0500 (Wed, 15 Jan 2020)
EndedAt: 2020-01-15 19:57:16 -0500 (Wed, 15 Jan 2020)
EllapsedTime: 21.9 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data logicFS
###
##############################################################################
##############################################################################


* checking for file ‘logicFS/DESCRIPTION’ ... OK
* preparing ‘logicFS’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘logicFS.Rnw’ using Sweave
Loading required package: LogicReg
Loading required package: survival
Loading required package: mcbiopi
Warning: For 1 of the 23 interactions, all observations have the same value.
These interactions are thus removed.
Warning: For 1 of the 23 interactions, all observations have the same value.
These interactions are thus removed.
Error: processing vignette 'logicFS.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'logicFS.tex' failed.
LaTeX errors:
!pdfTeX error: pdflatex (file ./logicfs.pdf): xpdf: reading PDF image failed
 ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘logicFS.Rnw’

SUMMARY: processing the following file failed:
  ‘logicFS.Rnw’

Error: Vignette re-building failed.
Execution halted