Christophe Georgescu
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/infercnv |
| Branch: RELEASE_3_11 |
| Last Commit: c422114 |
| Last Changed Date: 2020-04-27 15:26:59 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:52 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE infercnv PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 876/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| infercnv 1.4.0 Christophe Georgescu
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: infercnv |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/infercnv_1.4.0.tar.gz && rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=infercnv.buildbin-libdir infercnv_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL infercnv_1.4.0.zip && rm infercnv_1.4.0.tar.gz infercnv_1.4.0.zip |
| StartedAt: 2020-10-16 17:57:27 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:59:45 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 138.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/infercnv_1.4.0.tar.gz && rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=infercnv.buildbin-libdir infercnv_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL infercnv_1.4.0.zip && rm infercnv_1.4.0.tar.gz infercnv_1.4.0.zip
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install for i386
* installing *source* package 'infercnv' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'infercnv'
finding HTML links ... done
CreateInfercnvObject html
HMM_states html
MCMC_inferCNV-class html
add_to_seurat html
annots html
apply_median_filtering html
color.palette html
data html
filterHighPNormals html
genes html
inferCNVBayesNet html
infercnv-class html
infercnv-package html
infercnv_obj html
mcmc_obj html
plot_cnv html
plot_per_group html
run html
sample_object html
validate_infercnv_obj html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'infercnv' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'infercnv' as infercnv_1.4.0.zip
* DONE (infercnv)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'infercnv' successfully unpacked and MD5 sums checked