Zilu Zhou
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/iCNV |
| Branch: RELEASE_3_11 |
| Last Commit: 5261c78 |
| Last Changed Date: 2020-04-27 15:14:51 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:51 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE iCNV PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 852/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| iCNV 1.8.0 Zilu Zhou
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |
| Package: iCNV |
| Version: 1.8.0 |
| Command: rm -rf iCNV.buildbin-libdir && mkdir iCNV.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iCNV.buildbin-libdir iCNV_1.8.0.tar.gz |
| StartedAt: 2020-10-17 10:47:16 -0400 (Sat, 17 Oct 2020) |
| EndedAt: 2020-10-17 10:48:07 -0400 (Sat, 17 Oct 2020) |
| EllapsedTime: 51.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: iCNV_1.8.0.zip |
| PackageFileSize: 1.901 MiB |
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### Running command:
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### rm -rf iCNV.buildbin-libdir && mkdir iCNV.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iCNV.buildbin-libdir iCNV_1.8.0.tar.gz
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install for i386
* installing *source* package 'iCNV' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Note: break used in wrong context: no loop is visible
** help
*** installing help indices
converting help for package 'iCNV'
finding HTML links ... done
bambaf_from_vcf html
bed_generator html
chr html
filenm html
get_array_input html
iCNV_detection html
icnv_output_to_gb html
icnv_res0 html
ngs_baf html
ngs_baf.chr html
ngs_baf.id html
ngs_baf.nm html
ngs_baf.pos html
ngs_plr html
ngs_plr.pos html
normObj html
output_list html
plotHMMscore html
plot_intensity html
plotindi html
projname html
qcObj html
sampname html
sampname_qc html
snp_baf html
snp_baf.pos html
snp_lrr html
snp_lrr.pos html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'iCNV' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'iCNV' as iCNV_1.8.0.zip
* DONE (iCNV)