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INSTALL report for epigenomix on tokay2

This page was generated on 2020-10-17 11:56:31 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE epigenomix PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 552/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
epigenomix 1.28.0
Hans-Ulrich Klein
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/epigenomix
Branch: RELEASE_3_11
Last Commit: e05ad34
Last Changed Date: 2020-04-27 14:33:37 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: epigenomix
Version: 1.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/epigenomix_1.28.0.tar.gz && rm -rf epigenomix.buildbin-libdir && mkdir epigenomix.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epigenomix.buildbin-libdir epigenomix_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL epigenomix_1.28.0.zip && rm epigenomix_1.28.0.tar.gz epigenomix_1.28.0.zip
StartedAt: 2020-10-16 18:31:51 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:33:07 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 75.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/epigenomix_1.28.0.tar.gz && rm -rf epigenomix.buildbin-libdir && mkdir epigenomix.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epigenomix.buildbin-libdir epigenomix_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL epigenomix_1.28.0.zip && rm epigenomix_1.28.0.tar.gz epigenomix_1.28.0.zip
###
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install for i386

* installing *source* package 'epigenomix' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'epigenomix'
    finding HTML links ... done
    ChIPseqSet-class                        html  
    finding level-2 HTML links ... done

    MixModel-class                          html  
    MixModelBayes-class                     html  
    MixModelML-class                        html  
    MixtureComponent-class                  html  
    bayesMixModel                           html  
    calculateCrossCorrelation               html  
    eSet                                    html  
    fpkm                                    html  
    getAlignmentQuality                     html  
    integrateData                           html  
    mappedReads                             html  
    matchProbeToPromoter                    html  
    mlMixModel                              html  
    normalize                               html  
    normalizeChIP                           html  
    plotChains                              html  
    plotClassification                      html  
    plotComponents                          html  
    summarizeReads                          html  
    transToTSS                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'epigenomix' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'epigenomix' as epigenomix_1.28.0.zip
* DONE (epigenomix)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'epigenomix' successfully unpacked and MD5 sums checked