Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

BUILD BIN report for TCGAbiolinks on celaya2

This page was generated on 2020-01-16 13:43:04 -0500 (Thu, 16 Jan 2020).

Package 1703/1818HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TCGAbiolinks 2.15.3
Antonio Colaprico
Snapshot Date: 2020-01-15 16:46:30 -0500 (Wed, 15 Jan 2020)
URL: https://git.bioconductor.org/packages/TCGAbiolinks
Branch: master
Last Commit: c095eee
Last Changed Date: 2019-12-22 10:02:51 -0500 (Sun, 22 Dec 2019)
malbec2 Linux (Ubuntu 18.04.3 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK [ OK ]

Summary

Package: TCGAbiolinks
Version: 2.15.3
Command: rm -rf TCGAbiolinks.buildbin-libdir && mkdir TCGAbiolinks.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh TCGAbiolinks_2.15.3.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R TCGAbiolinks.buildbin-libdir
StartedAt: 2020-01-16 11:56:04 -0500 (Thu, 16 Jan 2020)
EndedAt: 2020-01-16 11:57:46 -0500 (Thu, 16 Jan 2020)
EllapsedTime: 101.7 seconds
RetCode: 0
Status:  OK 
PackageFile: TCGAbiolinks_2.15.3.tgz
PackageFileSize: 61.27 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf TCGAbiolinks.buildbin-libdir && mkdir TCGAbiolinks.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh TCGAbiolinks_2.15.3.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R TCGAbiolinks.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=TCGAbiolinks.buildbin-libdir TCGAbiolinks_2.15.3.tar.gz'
>>>>>>> 

* installing *source* package ‘TCGAbiolinks’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TCGAbiolinks)