Davide Risso
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/SingleCellExperiment |
| Branch: RELEASE_3_11 |
| Last Commit: dabf613 |
| Last Changed Date: 2020-04-28 00:25:32 -0400 (Tue, 28 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:49 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE SingleCellExperiment PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1671/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SingleCellExperiment 1.10.1 Davide Risso
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | NA | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: SingleCellExperiment |
| Version: 1.10.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SingleCellExperiment_1.10.1.tar.gz && rm -rf SingleCellExperiment.buildbin-libdir && mkdir SingleCellExperiment.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SingleCellExperiment.buildbin-libdir SingleCellExperiment_1.10.1.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SingleCellExperiment_1.10.1.zip && rm SingleCellExperiment_1.10.1.tar.gz SingleCellExperiment_1.10.1.zip |
| StartedAt: 2020-10-16 17:56:25 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:57:18 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 52.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SingleCellExperiment_1.10.1.tar.gz && rm -rf SingleCellExperiment.buildbin-libdir && mkdir SingleCellExperiment.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SingleCellExperiment.buildbin-libdir SingleCellExperiment_1.10.1.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SingleCellExperiment_1.10.1.zip && rm SingleCellExperiment_1.10.1.tar.gz SingleCellExperiment_1.10.1.zip
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install for i386
* installing *source* package 'SingleCellExperiment' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SingleCellExperiment'
finding HTML links ... done
LEM-combine html
LEM-getset html
LEM-misc html
LEM-subset html
LinearEmbeddingMatrix html
SingleCellExperiment html
finding level-2 HTML links ... done
altExps html
assays html
colLabels html
combine html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp2RtqaR/R.INSTALL1b8c41a72213/SingleCellExperiment/man/combine.Rd:27: file link 'rbind' in package 'base' does not exist and so has been treated as a topic
defunct html
internals html
miscellaneous html
reducedDims html
sizeFactors html
splitAltExps html
swapAltExp html
updateObject html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SingleCellExperiment' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SingleCellExperiment' as SingleCellExperiment_1.10.1.zip
* DONE (SingleCellExperiment)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'SingleCellExperiment' successfully unpacked and MD5 sums checked