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INSTALL report for SBGNview on tokay2

This page was generated on 2020-10-17 11:57:44 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE SBGNview PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1577/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SBGNview 1.2.0
Xiaoxi Dong
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/SBGNview
Branch: RELEASE_3_11
Last Commit: 4c9a3d3
Last Changed Date: 2020-04-27 15:28:15 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SBGNview
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SBGNview_1.2.0.tar.gz && rm -rf SBGNview.buildbin-libdir && mkdir SBGNview.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SBGNview.buildbin-libdir SBGNview_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SBGNview_1.2.0.zip && rm SBGNview_1.2.0.tar.gz SBGNview_1.2.0.zip
StartedAt: 2020-10-16 17:59:37 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:00:58 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 80.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SBGNview_1.2.0.tar.gz && rm -rf SBGNview.buildbin-libdir && mkdir SBGNview.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SBGNview.buildbin-libdir SBGNview_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SBGNview_1.2.0.zip && rm SBGNview_1.2.0.tar.gz SBGNview_1.2.0.zip
###
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100  359k  100  359k    0     0  3111k      0 --:--:-- --:--:-- --:--:-- 3301k

install for i386

* installing *source* package 'SBGNview' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SBGNview'
    finding HTML links ... done
    SBGNview                                html  
    SBGNview.obj                            html  
    arc-class                               html  
    changeDataId                            html  
    changeIds                               html  
    downloadSbgnFile                        html  
    findPathways                            html  
    getMolList                              html  
    glyph-class                             html  
    highlightArcs                           html  
    highlightNodes                          html  
    highlightPath                           html  
    loadMappingTable                        html  
    mapped.ids                              html  
    outputFile-set                          html  
    outputFile                              html  
    pathways.info                           html  
    pathways.stat                           html  
    plus-.SBGNview                          html  
    print.SBGNview                          html  
    renderSbgn                              html  
    sbgnNodes                               html  
    spline.arc-class                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SBGNview' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SBGNview' as SBGNview_1.2.0.zip
* DONE (SBGNview)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'SBGNview' successfully unpacked and MD5 sums checked