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INSTALL report for PAPi on tokay2

This page was generated on 2020-10-17 11:57:21 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE PAPi PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1265/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PAPi 1.28.0
Raphael Aggio
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/PAPi
Branch: RELEASE_3_11
Last Commit: 7fd4030
Last Changed Date: 2020-04-27 14:34:15 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: PAPi
Version: 1.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/PAPi_1.28.0.tar.gz && rm -rf PAPi.buildbin-libdir && mkdir PAPi.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PAPi.buildbin-libdir PAPi_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL PAPi_1.28.0.zip && rm PAPi_1.28.0.tar.gz PAPi_1.28.0.zip
StartedAt: 2020-10-16 17:27:03 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:28:25 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 82.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/PAPi_1.28.0.tar.gz && rm -rf PAPi.buildbin-libdir && mkdir PAPi.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PAPi.buildbin-libdir PAPi_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL PAPi_1.28.0.zip && rm PAPi_1.28.0.tar.gz PAPi_1.28.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  517k  100  517k    0     0  8232k      0 --:--:-- --:--:-- --:--:-- 9244k

install for i386

* installing *source* package 'PAPi' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'PAPi'
    finding HTML links ... done
    PAPi-package                            html  
    addKeggCodes                            html  
    buildDatabase                           html  
    keggLibrary                             html  
    metabolomicsData                        html  
    papi                                    html  
    papiData                                html  
    papiHtest                               html  
    papiLine                                html  
    papiResults                             html  
** building package indices
** installing vignettes
   'PAPiPackage.Rnw' 
** testing if installed package can be loaded from temporary location
Warning: Package 'PAPi' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package can be loaded from final location
Warning: Package 'PAPi' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'PAPi' ...
** testing if installed package can be loaded
Warning: Package 'PAPi' is deprecated and will be removed from Bioconductor
  version 3.12
* MD5 sums
packaged installation of 'PAPi' as PAPi_1.28.0.zip
* DONE (PAPi)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'PAPi' successfully unpacked and MD5 sums checked