Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

BUILD BIN report for M3D on tokay2

This page was generated on 2020-10-17 11:56:59 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE M3D PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 965/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
M3D 1.22.0
Tom Mayo
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/M3D
Branch: RELEASE_3_11
Last Commit: 09ed714
Last Changed Date: 2020-04-27 14:42:10 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: M3D
Version: 1.22.0
Command: rm -rf M3D.buildbin-libdir && mkdir M3D.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=M3D.buildbin-libdir M3D_1.22.0.tar.gz
StartedAt: 2020-10-17 10:54:22 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 10:55:10 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 47.3 seconds
RetCode: 0
Status:  OK  
PackageFile: M3D_1.22.0.zip
PackageFileSize: 1.301 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf M3D.buildbin-libdir && mkdir M3D.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=M3D.buildbin-libdir M3D_1.22.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'M3D' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c cpp_fns.cpp -o cpp_fns.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o M3D.dll tmp.def RcppExports.o cpp_fns.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/biocbuild/bbs-3.11-bioc/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/M3D.buildbin-libdir/00LOCK-M3D/00new/M3D/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'M3D'
    finding HTML links ... done
    CpGsDemo                                html  
    M3D-package                             html  
    M3D_Single                              html  
    M3D_Wrapper                             html  
    M3D_Wrapper_lite                        html  
    MMDlistDemo                             html  
    PDemo                                   html  
    determineGroupComps                     html  
    findComps                               html  
    medianFreq                              html  
    median_freq                             html  
    plotCoverageSampleProfiles              html  
    plotMethProfile                         html  
    plotMethSampleProfiles                  html  
    pvals                                   html  
    pvals_lite                              html  
    readBedFiles                            html  
    readBedRaw                              html  
    rrbsDemo                                html  
    test_colData_structure                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'M3D' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package can be loaded from final location
Warning: Package 'M3D' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'M3D' as M3D_1.22.0.zip
* DONE (M3D)