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BUILD BIN report for LOBSTAHS on tokay2

This page was generated on 2020-10-17 11:56:58 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE LOBSTAHS PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 947/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
LOBSTAHS 1.14.0
James Collins
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/LOBSTAHS
Branch: RELEASE_3_11
Last Commit: fe67494
Last Changed Date: 2020-04-27 14:59:17 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: LOBSTAHS
Version: 1.14.0
Command: rm -rf LOBSTAHS.buildbin-libdir && mkdir LOBSTAHS.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOBSTAHS.buildbin-libdir LOBSTAHS_1.14.0.tar.gz
StartedAt: 2020-10-17 10:53:19 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 10:54:58 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 98.8 seconds
RetCode: 0
Status:  OK  
PackageFile: LOBSTAHS_1.14.0.zip
PackageFileSize: 2.47 MiB

Command output

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### Running command:
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###   rm -rf LOBSTAHS.buildbin-libdir && mkdir LOBSTAHS.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOBSTAHS.buildbin-libdir LOBSTAHS_1.14.0.tar.gz
###
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install for i386

* installing *source* package 'LOBSTAHS' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning message:
replacing previous import 'xcms::plot' by 'graphics::plot' when loading 'CAMERA' 
Creating a new generic function for 'polarity<-' in package 'LOBSTAHS'
** help
*** installing help indices
  converting help for package 'LOBSTAHS'
    finding HTML links ... done
    LOBSet-class                            html  
    finding level-2 HTML links ... done

    LOBSet                                  html  
    LOBdbase-class                          html  
    LOBdbase                                html  
    LOBdefaults                             html  
    doLOBscreen                             html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpAfacV6/R.INSTALL34f046b97eb/LOBSTAHS/man/doLOBscreen.Rd:20: file link 'findIsotopes' in package 'CAMERA' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpAfacV6/R.INSTALL34f046b97eb/LOBSTAHS/man/doLOBscreen.Rd:41: file link 'findIsotopes' in package 'CAMERA' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpAfacV6/R.INSTALL34f046b97eb/LOBSTAHS/man/doLOBscreen.Rd:125: file link 'findIsotopes' in package 'CAMERA' does not exist and so has been treated as a topic
    exportDBtoCSV                           html  
    extractLOBdbasedata                     html  
    generateLOBdbase                        html  
    getLOBpeaklist                          html  
    loadLOBdbase                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'xcms::plot' by 'graphics::plot' when loading 'CAMERA'
Warning: multiple methods tables found for 'polarity<-'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'xcms::plot' by 'graphics::plot' when loading 'CAMERA'
Warning: multiple methods tables found for 'polarity<-'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'LOBSTAHS' ...
** testing if installed package can be loaded
Warning: replacing previous import 'xcms::plot' by 'graphics::plot' when loading 'CAMERA'
Warning: multiple methods tables found for 'polarity<-'
* MD5 sums
packaged installation of 'LOBSTAHS' as LOBSTAHS_1.14.0.zip
* DONE (LOBSTAHS)