Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

INSTALL report for sights on tokay2

This page was generated on 2020-10-17 11:57:48 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE sights PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1654/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sights 1.14.0
Elika Garg
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/sights
Branch: RELEASE_3_11
Last Commit: 27db3aa
Last Changed Date: 2020-04-27 14:58:26 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: sights
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/sights_1.14.0.tar.gz && rm -rf sights.buildbin-libdir && mkdir sights.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sights.buildbin-libdir sights_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL sights_1.14.0.zip && rm sights_1.14.0.tar.gz sights_1.14.0.zip
StartedAt: 2020-10-16 17:19:41 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:20:48 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 67.1 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/sights_1.14.0.tar.gz && rm -rf sights.buildbin-libdir && mkdir sights.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sights.buildbin-libdir sights_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL sights_1.14.0.zip && rm sights_1.14.0.tar.gz sights_1.14.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2443k  100 2443k    0     0  29.3M      0 --:--:-- --:--:-- --:--:-- 32.2M

install for i386

* installing *source* package 'sights' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'sights'
    finding HTML links ... done
    ex_dataMatrix                           html  
    inglese                                 html  
    normLoess                               html  
    normMedFil                              html  
    normR                                   html  
    normRobZ                                html  
    normSPAWN                               html  
    normSights                              html  
    normZ                                   html  
    plot3d                                  html  
    plotAutoco                              html  
    plotBox                                 html  
    plotHeatmap                             html  
    plotHist                                html  
    plotIGFit                               html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpaInpot/R.INSTALLc784fd84aa1/sights/man/plotIGFit.Rd:19: file link 'geom_step' in package 'ggplot2' does not exist and so has been treated as a topic
    plotScatter                             html  
    plotSights                              html  
    statFDR                                 html  
    statRVM                                 html  
    statSights                              html  
    statT                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'sights' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sights' as sights_1.14.0.zip
* DONE (sights)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'sights' successfully unpacked and MD5 sums checked