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INSTALL report for scBFA on tokay2

This page was generated on 2020-10-17 11:57:45 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE scBFA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1585/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scBFA 1.2.0
Ruoxin Li
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/scBFA
Branch: RELEASE_3_11
Last Commit: b42ae7f
Last Changed Date: 2020-04-27 15:28:56 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: scBFA
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/scBFA_1.2.0.tar.gz && rm -rf scBFA.buildbin-libdir && mkdir scBFA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scBFA.buildbin-libdir scBFA_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL scBFA_1.2.0.zip && rm scBFA_1.2.0.tar.gz scBFA_1.2.0.zip
StartedAt: 2020-10-16 19:04:45 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:09:11 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 265.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/scBFA_1.2.0.tar.gz && rm -rf scBFA.buildbin-libdir && mkdir scBFA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scBFA.buildbin-libdir scBFA_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL scBFA_1.2.0.zip && rm scBFA_1.2.0.tar.gz scBFA_1.2.0.zip
###
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install for i386

* installing *source* package 'scBFA' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'scBFA'
    finding HTML links ... done
    BinaryPCA                               html  
    InitBinaryFA                            html  
    OptimBFA                                html  
    celltype                                html  
    celltype_toy                            html  
    diagnose                                html  
    disperPlot                              html  
    exprdata                                html  
    getGeneExpr                             html  
    getLoading                              html  
    getScore                                html  
    gradient                                html  
    gradient_chunk                          html  
    neg_loglikelihood                       html  
    neg_loglikelihood_chunk                 html  
    restore                                 html  
    scNoiseSim                              html  
    scbfa                                   html  
    zinb_toy                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'scBFA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'scBFA' as scBFA_1.2.0.zip
* DONE (scBFA)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'scBFA' successfully unpacked and MD5 sums checked