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INSTALL report for riboSeqR on tokay2

This page was generated on 2020-10-17 11:57:38 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE riboSeqR PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1489/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
riboSeqR 1.22.0
Thomas J. Hardcastle
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/riboSeqR
Branch: RELEASE_3_11
Last Commit: 8b22124
Last Changed Date: 2020-04-27 14:41:15 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: riboSeqR
Version: 1.22.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/riboSeqR_1.22.0.tar.gz && rm -rf riboSeqR.buildbin-libdir && mkdir riboSeqR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=riboSeqR.buildbin-libdir riboSeqR_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL riboSeqR_1.22.0.zip && rm riboSeqR_1.22.0.tar.gz riboSeqR_1.22.0.zip
StartedAt: 2020-10-16 18:24:57 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:25:33 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 35.8 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/riboSeqR_1.22.0.tar.gz && rm -rf riboSeqR.buildbin-libdir && mkdir riboSeqR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=riboSeqR.buildbin-libdir riboSeqR_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL riboSeqR_1.22.0.zip && rm riboSeqR_1.22.0.tar.gz riboSeqR_1.22.0.zip
###
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install for i386

* installing *source* package 'riboSeqR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'riboSeqR'
    finding HTML links ... done
    filterHits                              html  
    findCDS                                 html  
    frameCounting                           html  
    frameShift                              html  
    lengthDist                              html  
    libScales                               html  
    logoContext                             html  
    plotCDS                                 html  
    plotTranscript                          html  
    readRibodata                            html  
    riboCoding-class                        html  
    riboData-class                          html  
    riboSeqR-package                        html  
    rnaCounts                               html  
    sliceCounts                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'riboSeqR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'riboSeqR' as riboSeqR_1.22.0.zip
* DONE (riboSeqR)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'riboSeqR' successfully unpacked and MD5 sums checked