Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

INSTALL report for miRBaseConverter on tokay2

This page was generated on 2020-10-17 11:57:07 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE miRBaseConverter PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1090/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
miRBaseConverter 1.12.0
Taosheng Xu
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/miRBaseConverter
Branch: RELEASE_3_11
Last Commit: 430670d
Last Changed Date: 2020-04-27 15:08:06 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: miRBaseConverter
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/miRBaseConverter_1.12.0.tar.gz && rm -rf miRBaseConverter.buildbin-libdir && mkdir miRBaseConverter.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRBaseConverter.buildbin-libdir miRBaseConverter_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL miRBaseConverter_1.12.0.zip && rm miRBaseConverter_1.12.0.tar.gz miRBaseConverter_1.12.0.zip
StartedAt: 2020-10-16 16:48:53 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 16:49:25 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 31.9 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/miRBaseConverter_1.12.0.tar.gz && rm -rf miRBaseConverter.buildbin-libdir && mkdir miRBaseConverter.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRBaseConverter.buildbin-libdir miRBaseConverter_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL miRBaseConverter_1.12.0.zip && rm miRBaseConverter_1.12.0.tar.gz miRBaseConverter_1.12.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2253k  100 2253k    0     0  28.2M      0 --:--:-- --:--:-- --:--:-- 30.9M

install for i386

* installing *source* package 'miRBaseConverter' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'miRBaseConverter'
    finding HTML links ... done
    checkMiRNAAlive                         html  
    checkMiRNAFamily                        html  
    checkMiRNAVersion                       html  
    getAllMiRNAs                            html  
    getAllSpecies                           html  
    getAllVersionInfo                       html  
    getMiRNAHistory                         html  
    getMiRNASequence                        html  
    getMiRNATable                           html  
    goTo_miRBase                            html  
    goTo_miRNAFamily                        html  
    miRNATest                               html  
    miRNAVersionConvert                     html  
    miRNA_AccessionToName                   html  
    miRNA_MatureToPrecursor                 html  
    miRNA_NameToAccession                   html  
    miRNA_PrecursorToMature                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'miRBaseConverter' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'miRBaseConverter' as miRBaseConverter_1.12.0.zip
* DONE (miRBaseConverter)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'miRBaseConverter' successfully unpacked and MD5 sums checked