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INSTALL report for metaMS on tokay2

This page was generated on 2020-10-17 11:57:03 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE metaMS PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1040/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
metaMS 1.24.0
Yann Guitton
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/metaMS
Branch: RELEASE_3_11
Last Commit: 2c2d4b6
Last Changed Date: 2020-04-27 14:39:49 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: metaMS
Version: 1.24.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/metaMS_1.24.0.tar.gz && rm -rf metaMS.buildbin-libdir && mkdir metaMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metaMS.buildbin-libdir metaMS_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL metaMS_1.24.0.zip && rm metaMS_1.24.0.tar.gz metaMS_1.24.0.zip
StartedAt: 2020-10-16 19:02:14 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:04:00 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 105.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/metaMS_1.24.0.tar.gz && rm -rf metaMS.buildbin-libdir && mkdir metaMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metaMS.buildbin-libdir metaMS_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL metaMS_1.24.0.zip && rm metaMS_1.24.0.tar.gz metaMS_1.24.0.zip
###
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install for i386

* installing *source* package 'metaMS' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning message:
replacing previous import 'xcms::plot' by 'graphics::plot' when loading 'CAMERA' 
** help
*** installing help indices
  converting help for package 'metaMS'
    finding HTML links ... done
    AnnotateTable                           html  
    FEMsettings                             html  
    finding level-2 HTML links ... done

    GCresults                               html  
    LCDBtest                                html  
    LCresults                               html  
    addRI                                   html  
    alignmentLC                             html  
    annotations2tab                         html  
    constructExpPseudoSpectra               html  
    createSTDdbGC                           html  
    createSTDdbLC                           html  
    errf                                    html  
    exptable                                html  
    getAnnotationLC                         html  
    getAnnotationMat                        html  
    getFeatureInfo                          html  
    getPeakTable                            html  
    match2ExtDB                             html  
    matchExpSpec                            html  
    matchSamples2DB                         html  
    matchSamples2Samples                    html  
    metaMS-package                          html  
    metaMSsettings-class                    html  
    metaSetting-methods                     html  
    msp                                     html  
    peakDetection                           html  
    plotPseudoSpectrum                      html  
    printString                             html  
    processStandards                        html  
    readStdInfo                             html  
    removeDoubleMasses                      html  
    runCAMERA                               html  
    runGC                                   html  
    runLC                                   html  
    threeStdsDB                             html  
    treat.DB                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'xcms::plot' by 'graphics::plot' when loading 'CAMERA'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'xcms::plot' by 'graphics::plot' when loading 'CAMERA'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'metaMS' ...
** testing if installed package can be loaded
Warning: replacing previous import 'xcms::plot' by 'graphics::plot' when loading 'CAMERA'
* MD5 sums
packaged installation of 'metaMS' as metaMS_1.24.0.zip
* DONE (metaMS)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'metaMS' successfully unpacked and MD5 sums checked