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INSTALL report for Uniquorn on tokay2

This page was generated on 2020-10-17 11:57:58 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE Uniquorn PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1859/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Uniquorn 2.8.0
'Raik Otto'
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/Uniquorn
Branch: RELEASE_3_11
Last Commit: 22e7622
Last Changed Date: 2020-04-27 14:55:14 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Uniquorn
Version: 2.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Uniquorn_2.8.0.tar.gz && rm -rf Uniquorn.buildbin-libdir && mkdir Uniquorn.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Uniquorn.buildbin-libdir Uniquorn_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Uniquorn_2.8.0.zip && rm Uniquorn_2.8.0.tar.gz Uniquorn_2.8.0.zip
StartedAt: 2020-10-16 19:16:08 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:17:54 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 105.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Uniquorn_2.8.0.tar.gz && rm -rf Uniquorn.buildbin-libdir && mkdir Uniquorn.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Uniquorn.buildbin-libdir Uniquorn_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Uniquorn_2.8.0.zip && rm Uniquorn_2.8.0.tar.gz Uniquorn_2.8.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100 2292k  100 2292k    0     0  22.2M      0 --:--:-- --:--:-- --:--:-- 23.8M

install for i386

* installing *source* package 'Uniquorn' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Uniquorn'
    finding HTML links ... done
    add_custom_vcf_to_database              html  
    add_missing_cls                         html  
    add_p_q_values_statistics               html  
    add_penalty_statistics                  html  
    create_bed_file                         html  
    identify_vcf_file                       html  
    init_and_load_identification            html  
    initiate_canonical_databases            html  
    match_query_ccl_to_database             html  
    parse_ccle_genotype_data                html  
    parse_cosmic_genotype_data              html  
    parse_vcf_file                          html  
    parse_vcf_query_into_db                 html  
    read_library_names                      html  
    read_mutation_grange_objects            html  
    remove_ccls_from_database               html  
    remove_library_from_database            html  
    show_contained_ccls                     html  
    show_contained_variants_for_ccl         html  
    show_contained_variants_in_library      html  
    show_which_ccls_contain_variant         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Uniquorn' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Uniquorn' as Uniquorn_2.8.0.zip
* DONE (Uniquorn)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'Uniquorn' successfully unpacked and MD5 sums checked