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INSTALL report for TBSignatureProfiler on tokay2

This page was generated on 2020-10-17 11:57:55 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE TBSignatureProfiler PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1782/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TBSignatureProfiler 1.0.0
David Jenkins
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/TBSignatureProfiler
Branch: RELEASE_3_11
Last Commit: 67171e1
Last Changed Date: 2020-04-27 15:36:15 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TBSignatureProfiler
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/TBSignatureProfiler_1.0.0.tar.gz && rm -rf TBSignatureProfiler.buildbin-libdir && mkdir TBSignatureProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TBSignatureProfiler.buildbin-libdir TBSignatureProfiler_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL TBSignatureProfiler_1.0.0.zip && rm TBSignatureProfiler_1.0.0.tar.gz TBSignatureProfiler_1.0.0.zip
StartedAt: 2020-10-16 18:59:00 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:00:19 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 79.5 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/TBSignatureProfiler_1.0.0.tar.gz && rm -rf TBSignatureProfiler.buildbin-libdir && mkdir TBSignatureProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TBSignatureProfiler.buildbin-libdir TBSignatureProfiler_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL TBSignatureProfiler_1.0.0.zip && rm TBSignatureProfiler_1.0.0.tar.gz TBSignatureProfiler_1.0.0.zip
###
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100 1570k  100 1570k    0     0  22.0M      0 --:--:-- --:--:-- --:--:-- 23.9M

install for i386

* installing *source* package 'TBSignatureProfiler' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TBSignatureProfiler'
    finding HTML links ... done
    Bootstrap_LOOCV_LR_AUC                  html  
    LOOAUC_simple_multiple_noplot_one_df    html  
    SignatureQuantitative                   html  
    TBSPapp                                 html  
    TB_hiv                                  html  
    TB_indian                               html  
    TBcommon                                html  
    TBsignatures                            html  
    bootstrapAUC                            html  
    common_sigAnnotData                     html  
    compareAlgs                             html  
    compareBoxplots                         html  
    deseq2_norm_rle                         html  
    distinctColors                          html  
    mkAssay                                 html  
    plotQuantitative                        html  
    runTBsigProfiler                        html  
    sigAnnotData                            html  
    signatureBoxplot                        html  
    signatureGeneHeatmap                    html  
    signatureHeatmap                        html  
    signatureROCplot                        html  
    signatureROCplot_CI                     html  
    tableAUC                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TBSignatureProfiler' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TBSignatureProfiler' as TBSignatureProfiler_1.0.0.zip
* DONE (TBSignatureProfiler)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'TBSignatureProfiler' successfully unpacked and MD5 sums checked