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INSTALL report for SynMut on tokay2

This page was generated on 2020-10-17 11:57:55 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE SynMut PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1775/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SynMut 1.4.0
Haogao Gu
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/SynMut
Branch: RELEASE_3_11
Last Commit: 4319bc2
Last Changed Date: 2020-04-27 15:26:45 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SynMut
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SynMut_1.4.0.tar.gz && rm -rf SynMut.buildbin-libdir && mkdir SynMut.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SynMut.buildbin-libdir SynMut_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SynMut_1.4.0.zip && rm SynMut_1.4.0.tar.gz SynMut_1.4.0.zip
StartedAt: 2020-10-16 17:24:03 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:24:50 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 46.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SynMut_1.4.0.tar.gz && rm -rf SynMut.buildbin-libdir && mkdir SynMut.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SynMut.buildbin-libdir SynMut_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SynMut_1.4.0.zip && rm SynMut_1.4.0.tar.gz SynMut_1.4.0.zip
###
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100 20614  100 20614    0     0   412k      0 --:--:-- --:--:-- --:--:--  479k

install for i386

* installing *source* package 'SynMut' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SynMut'
    finding HTML links ... done
    codon_dist-methods                      html  
    codon_mimic-methods                     html  
    codon_random-methods                    html  
    codon_to-methods                        html  
    dinu_dist-methods                       html  
    dinu_to-methods                         html  
    get_cu-methods                          html  
    get_dna-methods                         html  
    get_du-methods                          html  
    get_freq-methods                        html  
    get_nu-methods                          html  
    get_region-methods                      html  
    get_rscu-methods                        html  
    input_seq-methods                       html  
    regioned_dna-class                      html  
    seq_random-methods                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SynMut' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SynMut' as SynMut_1.4.0.zip
* DONE (SynMut)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'SynMut' successfully unpacked and MD5 sums checked