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INSTALL report for RITAN on tokay2

This page was generated on 2020-10-17 11:57:38 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE RITAN PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1495/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RITAN 1.12.0
Michael Zimmermann
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/RITAN
Branch: RELEASE_3_11
Last Commit: eb467d9
Last Changed Date: 2020-04-27 15:07:44 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: RITAN
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/RITAN_1.12.0.tar.gz && rm -rf RITAN.buildbin-libdir && mkdir RITAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RITAN.buildbin-libdir RITAN_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL RITAN_1.12.0.zip && rm RITAN_1.12.0.tar.gz RITAN_1.12.0.zip
StartedAt: 2020-10-16 18:09:03 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:09:51 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 47.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/RITAN_1.12.0.tar.gz && rm -rf RITAN.buildbin-libdir && mkdir RITAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RITAN.buildbin-libdir RITAN_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL RITAN_1.12.0.zip && rm RITAN_1.12.0.tar.gz RITAN_1.12.0.zip
###
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install for i386

* installing *source* package 'RITAN' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RITAN'
    finding HTML links ... done
    as.graph                                html  
    check_any_net_input                     html  
    check_net_input                         html  
    cov_undirected                          html  
    enrichment_symbols                      html  
    geneset_overlap                         html  
    icon_single_within                      html  
    icon_test                               html  
    load_all_protein_coding_symbols         html  
    load_geneset_symbols                    html  
    network_overlap                         html  
    plot.term_enrichment                    html  
    plot.term_enrichment_by_subset          html  
    readGMT                                 html  
    readSIF                                 html  
    resource_reduce                         html  
    show_active_genesets_hist               html  
    summary.term_enrichment                 html  
    summary.term_enrichment_by_subset       html  
    term_enrichment                         html  
    term_enrichment_by_subset               html  
    vac1.day0vs31.de.genes                  html  
    vac1.day0vs56.de.genes                  html  
    vac2.day0vs31.de.genes                  html  
    vac2.day0vs56.de.genes                  html  
    writeGMT                                html  
    write_simple_table                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RITAN' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RITAN' as RITAN_1.12.0.zip
* DONE (RITAN)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'RITAN' successfully unpacked and MD5 sums checked