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INSTALL report for PCAN on tokay2

This page was generated on 2020-10-17 11:57:22 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE PCAN PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1283/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PCAN 1.16.0
Matthew Page and Patrice Godard
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/PCAN
Branch: RELEASE_3_11
Last Commit: 588559b
Last Changed Date: 2020-04-27 14:55:28 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: PCAN
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/PCAN_1.16.0.tar.gz && rm -rf PCAN.buildbin-libdir && mkdir PCAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PCAN.buildbin-libdir PCAN_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL PCAN_1.16.0.zip && rm PCAN_1.16.0.tar.gz PCAN_1.16.0.zip
StartedAt: 2020-10-16 18:58:06 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:59:12 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 66.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/PCAN_1.16.0.tar.gz && rm -rf PCAN.buildbin-libdir && mkdir PCAN.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PCAN.buildbin-libdir PCAN_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL PCAN_1.16.0.zip && rm PCAN_1.16.0.tar.gz PCAN_1.16.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1859k  100 1859k    0     0  18.7M      0 --:--:-- --:--:-- --:--:-- 20.1M

install for i386

* installing *source* package 'PCAN' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'PCAN'
    finding HTML links ... done
    calcHpSim                               html  
    compareHPSets                           html  
    finding level-2 HTML links ... done

    computeHpIC                             html  
    geneByHp                                html  
    geneByTrait                             html  
    geneDef                                 html  
    hpByTrait                               html  
    hpDef                                   html  
    hpGeneHeatmap                           html  
    hpGeneListComp                          html  
    hpSetCompBestMatch                      html  
    hpSetCompSummary                        html  
    hp_ancestors                            html  
    hp_class                                html  
    hp_descendants                          html  
    hqStrNw                                 html  
    hsEntrezByRPath                         html  
    rPath                                   html  
    traitDef                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'PCAN' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PCAN' as PCAN_1.16.0.zip
* DONE (PCAN)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'PCAN' successfully unpacked and MD5 sums checked