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INSTALL report for OGSA on tokay2

This page was generated on 2020-10-17 11:57:17 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE OGSA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1214/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OGSA 1.18.0
Michael F. Ochs
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/OGSA
Branch: RELEASE_3_11
Last Commit: 7b1fce0
Last Changed Date: 2020-04-27 14:50:12 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: OGSA
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/OGSA_1.18.0.tar.gz && rm -rf OGSA.buildbin-libdir && mkdir OGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OGSA.buildbin-libdir OGSA_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL OGSA_1.18.0.zip && rm OGSA_1.18.0.tar.gz OGSA_1.18.0.zip
StartedAt: 2020-10-16 17:10:33 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:11:03 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 29.8 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/OGSA_1.18.0.tar.gz && rm -rf OGSA.buildbin-libdir && mkdir OGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OGSA.buildbin-libdir OGSA_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL OGSA_1.18.0.zip && rm OGSA_1.18.0.tar.gz OGSA_1.18.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3176k  100 3176k    0     0  32.4M      0 --:--:-- --:--:-- --:--:-- 35.2M

install for i386

* installing *source* package 'OGSA' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'OGSA'
    finding HTML links ... done
    OGSA-package                            html  
    cnv                                     html  
    copaInt                                 html  
    copaIntE                                html  
    copaStat                                html  
    expr                                    html  
    expressionSetDataSet                    html  
    expressionSetPheno                      html  
    meth                                    html  
    outCallRank                             html  
    outCallRankE                            html  
    outCallTib                              html  
    outCallTibE                             html  
    outCount                                html  
    outMap                                  html  
    outRank                                 html  
    pathGS                                  html  
    pheno                                   html  
    testGScogps                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'OGSA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'OGSA' as OGSA_1.18.0.zip
* DONE (OGSA)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'OGSA' successfully unpacked and MD5 sums checked