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INSTALL report for MIGSA on tokay2

This page was generated on 2020-10-17 11:57:05 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE MIGSA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1080/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MIGSA 1.12.0
Juan C. Rodriguez
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/MIGSA
Branch: RELEASE_3_11
Last Commit: 42e73a2
Last Changed Date: 2020-04-27 15:05:44 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: MIGSA
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/MIGSA_1.12.0.tar.gz && rm -rf MIGSA.buildbin-libdir && mkdir MIGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MIGSA.buildbin-libdir MIGSA_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL MIGSA_1.12.0.zip && rm MIGSA_1.12.0.tar.gz MIGSA_1.12.0.zip
StartedAt: 2020-10-16 18:21:14 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:22:36 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 81.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/MIGSA_1.12.0.tar.gz && rm -rf MIGSA.buildbin-libdir && mkdir MIGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MIGSA.buildbin-libdir MIGSA_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL MIGSA_1.12.0.zip && rm MIGSA_1.12.0.tar.gz MIGSA_1.12.0.zip
###
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100 1625k  100 1625k    0     0  16.1M      0 --:--:-- --:--:-- --:--:-- 17.2M

install for i386

* installing *source* package 'MIGSA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MIGSA'
    finding HTML links ... done
    ExprData-class                          html  
    FitOptions-class                        html  
    GSEAparams-class                        html  
    Genesets-as.Genesets                    html  
    Genesets-enrichr                        html  
    Genesets-geneSetsFromFile               html  
    Genesets-loadGo                         html  
    IGSAinput-class                         html  
    IGSAinput-getDEGenes                    html  
    IGSAinput-getterSetters                 html  
    MIGSA                                   html  
    MIGSAPackage                            html  
    MIGSAmGSZ                               html  
    MIGSAres-GoAnalysis                     html  
    MIGSAres-class                          html  
    MIGSAres-common                         html  
    MIGSAres-genesManipulation              html  
    MIGSAres-getAdditionalInfo              html  
    MIGSAres-plots                          html  
    MIGSAres-setEnrCutoff                   html  
    SEAparams-class                         html  
    bcMigsaRes                              html  
    migsaRes                                html  
    summaryFunctions                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MIGSA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MIGSA' as MIGSA_1.12.0.zip
* DONE (MIGSA)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'MIGSA' successfully unpacked and MD5 sums checked