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INSTALL report for Logolas on tokay2

This page was generated on 2020-10-17 11:56:58 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE Logolas PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 951/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Logolas 1.12.0
Kushal Dey
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/Logolas
Branch: RELEASE_3_11
Last Commit: 3605e0e
Last Changed Date: 2020-04-27 15:05:24 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: Logolas
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Logolas_1.12.0.tar.gz && rm -rf Logolas.buildbin-libdir && mkdir Logolas.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Logolas.buildbin-libdir Logolas_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Logolas_1.12.0.zip && rm Logolas_1.12.0.tar.gz Logolas_1.12.0.zip
StartedAt: 2020-10-16 17:25:55 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:26:21 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 26.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Logolas_1.12.0.tar.gz && rm -rf Logolas.buildbin-libdir && mkdir Logolas.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Logolas.buildbin-libdir Logolas_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Logolas_1.12.0.zip && rm Logolas_1.12.0.tar.gz Logolas_1.12.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1228k  100 1228k    0     0  17.3M      0 --:--:-- --:--:-- --:--:-- 19.3M

install for i386

* installing *source* package 'Logolas' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Logolas'
    finding HTML links ... done
    EBF1_disc1                              html  
    GetConsensusSeq                         html  
    UMI                                     html  
    aRxiv                                   html  
    get_logo_heights                        html  
    get_plot                                html  
    get_viewport_logo                       html  
    himalayan_fauna                         html  
    histone_marks                           html  
    logo_pssm                               html  
    logomaker                               html  
    makemylogo                              html  
    mutation_sig                            html  
    nlogomaker                              html  
    plogomaker                              html  
    pssm                                    html  
    seqlogo_example                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Logolas' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Logolas' as Logolas_1.12.0.zip
* DONE (Logolas)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'Logolas' successfully unpacked and MD5 sums checked