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INSTALL report for EnrichedHeatmap on tokay2

This page was generated on 2020-10-17 11:56:31 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE EnrichedHeatmap PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 544/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EnrichedHeatmap 1.18.2
Zuguang Gu
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/EnrichedHeatmap
Branch: RELEASE_3_11
Last Commit: 6aff54a
Last Changed Date: 2020-05-02 04:51:49 -0400 (Sat, 02 May 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: EnrichedHeatmap
Version: 1.18.2
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/EnrichedHeatmap_1.18.2.tar.gz && rm -rf EnrichedHeatmap.buildbin-libdir && mkdir EnrichedHeatmap.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EnrichedHeatmap.buildbin-libdir EnrichedHeatmap_1.18.2.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL EnrichedHeatmap_1.18.2.zip && rm EnrichedHeatmap_1.18.2.tar.gz EnrichedHeatmap_1.18.2.zip
StartedAt: 2020-10-16 18:00:40 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:01:42 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 62.5 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/EnrichedHeatmap_1.18.2.tar.gz && rm -rf EnrichedHeatmap.buildbin-libdir && mkdir EnrichedHeatmap.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EnrichedHeatmap.buildbin-libdir EnrichedHeatmap_1.18.2.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL EnrichedHeatmap_1.18.2.zip && rm EnrichedHeatmap_1.18.2.tar.gz EnrichedHeatmap_1.18.2.zip
###
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100 17.8M  100 17.8M    0     0  67.4M      0 --:--:-- --:--:-- --:--:-- 69.2M

install for i386

* installing *source* package 'EnrichedHeatmap' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c dist_by_closeness.cpp -o dist_by_closeness.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o EnrichedHeatmap.dll tmp.def RcppExports.o dist_by_closeness.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/EnrichedHeatmap.buildbin-libdir/00LOCK-EnrichedHeatmap/00new/EnrichedHeatmap/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'EnrichedHeatmap'
    finding HTML links ... done
    EnrichedHeatmap                         html  
    finding level-2 HTML links ... done

    Extract.normalizedMatrix                html  
    anno_enriched                           html  
    as.normalizedMatrix                     html  
    copyAttr                                html  
    default_smooth_fun                      html  
    discretize                              html  
    dist_by_closeness                       html  
    enriched_score                          html  
    extract_anno_enriched                   html  
    failed_rows                             html  
    getSignalsFromList                      html  
    makeWindows                             html  
    normalizeToMatrix                       html  
    print.normalizedMatrix                  html  
    rbind.normalizedMatrix                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'EnrichedHeatmap' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c dist_by_closeness.cpp -o dist_by_closeness.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o EnrichedHeatmap.dll tmp.def RcppExports.o dist_by_closeness.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/EnrichedHeatmap.buildbin-libdir/EnrichedHeatmap/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EnrichedHeatmap' as EnrichedHeatmap_1.18.2.zip
* DONE (EnrichedHeatmap)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'EnrichedHeatmap' successfully unpacked and MD5 sums checked