Sara Ballouz
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/EGAD |
| Branch: RELEASE_3_11 |
| Last Commit: 74278c0 |
| Last Changed Date: 2020-04-27 14:57:37 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:30 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE EGAD PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 531/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| EGAD 1.16.0 Sara Ballouz
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: EGAD |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/EGAD_1.16.0.tar.gz && rm -rf EGAD.buildbin-libdir && mkdir EGAD.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EGAD.buildbin-libdir EGAD_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL EGAD_1.16.0.zip && rm EGAD_1.16.0.tar.gz EGAD_1.16.0.zip |
| StartedAt: 2020-10-16 18:04:53 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:07:18 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 145.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/EGAD_1.16.0.tar.gz && rm -rf EGAD.buildbin-libdir && mkdir EGAD.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EGAD.buildbin-libdir EGAD_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL EGAD_1.16.0.zip && rm EGAD_1.16.0.tar.gz EGAD_1.16.0.zip
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install for i386
* installing *source* package 'EGAD' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'EGAD'
finding HTML links ... done
GO.human html
GO.mouse html
GO.voc html
assortativity html
atrr.human html
attr.mouse html
auc_multifunc html
auprc html
auroc_analytic html
biogrid html
build_binary_network html
build_coexp_GEOID html
build_coexp_expressionSet html
build_coexp_network html
build_semantic_similarity_network html
build_weighted_network html
calculate_multifunc html
conv_smoother html
example_annotations html
example_binary_network html
example_coexpression html
example_neighbor_voting html
extend_network html
filter_network html
filter_network_cols html
filter_network_rows html
filter_orthologs html
fmeasure html
genes html
get_auc html
get_biogrid html
get_counts html
get_density html
get_expression_data_gemma html
get_expression_matrix_from_GEO html
get_phenocarta html
get_prc html
get_roc html
make_annotations html
make_gene_network html
make_genelist html
make_transparent html
neighbor_voting html
node_degree html
ortho html
pheno html
plot_densities html
plot_density_compare html
plot_distribution html
plot_network_heatmap html
plot_prc html
plot_roc html
plot_roc_overlay html
plot_value_compare html
predictions html
repmat html
run_GBA html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'EGAD' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EGAD' as EGAD_1.16.0.zip
* DONE (EGAD)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'EGAD' successfully unpacked and MD5 sums checked