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INSTALL report for DEFormats on tokay2

This page was generated on 2020-10-17 11:56:25 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE DEFormats PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 441/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DEFormats 1.16.0
Andrzej OleÅ›
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/DEFormats
Branch: RELEASE_3_11
Last Commit: 797baa1
Last Changed Date: 2020-04-27 14:56:04 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: DEFormats
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/DEFormats_1.16.0.tar.gz && rm -rf DEFormats.buildbin-libdir && mkdir DEFormats.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEFormats.buildbin-libdir DEFormats_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL DEFormats_1.16.0.zip && rm DEFormats_1.16.0.tar.gz DEFormats_1.16.0.zip
StartedAt: 2020-10-16 18:28:11 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:28:51 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 40.4 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/DEFormats_1.16.0.tar.gz && rm -rf DEFormats.buildbin-libdir && mkdir DEFormats.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEFormats.buildbin-libdir DEFormats_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL DEFormats_1.16.0.zip && rm DEFormats_1.16.0.tar.gz DEFormats_1.16.0.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  9164  100  9164    0     0   155k      0 --:--:-- --:--:-- --:--:--  178k

install for i386

* installing *source* package 'DEFormats' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'DGEList' from 'edgeR' in package 'DEFormats'
    (from the saved implicit definition)
** help
*** installing help indices
  converting help for package 'DEFormats'
    finding HTML links ... done
    DEFormats                               html  
    finding level-2 HTML links ... done

    DGEList                                 html  
    as.DESeqDataSet                         html  
    as.DGEList                              html  
    simulateNormFactors                     html  
    simulateRnaSeqData                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DEFormats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DEFormats' as DEFormats_1.16.0.zip
* DONE (DEFormats)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'DEFormats' successfully unpacked and MD5 sums checked