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INSTALL report for scPCA on tokay1

This page was generated on 2020-04-15 12:33:31 -0400 (Wed, 15 Apr 2020).

Package 1543/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scPCA 1.0.0
Philippe Boileau
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/scPCA
Branch: RELEASE_3_10
Last Commit: 83250fc
Last Changed Date: 2019-10-29 13:12:15 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: scPCA
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/scPCA_1.0.0.tar.gz && rm -rf scPCA.buildbin-libdir && mkdir scPCA.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scPCA.buildbin-libdir scPCA_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL scPCA_1.0.0.zip && rm scPCA_1.0.0.tar.gz scPCA_1.0.0.zip
StartedAt: 2020-04-14 19:07:22 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:08:00 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 38.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/scPCA_1.0.0.tar.gz && rm -rf scPCA.buildbin-libdir && mkdir scPCA.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scPCA.buildbin-libdir scPCA_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL scPCA_1.0.0.zip && rm scPCA_1.0.0.tar.gz scPCA_1.0.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1342k  100 1342k    0     0  24.7M      0 --:--:-- --:--:-- --:--:-- 26.7M

install for i386

* installing *source* package 'scPCA' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
Loading required namespace: scPCA
*** installing help indices
  converting help for package 'scPCA'
    finding HTML links ... done
    background_df                           html  
    bpContrastiveCov                        html  
    bpFitCPCA                               html  
    bpFitGrid                               html  
    checkArgs                               html  
    coerceMatrix                            html  
    contrastiveCov                          html  
    covMat                                  html  
    cvSelectParams                          html  
    fitCPCA                                 html  
    fitGrid                                 html  
    scPCA                                   html  
    selectParams                            html  
    toy_df                                  html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'scPCA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'scPCA' as scPCA_1.0.0.zip
* DONE (scPCA)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'scPCA' successfully unpacked and MD5 sums checked