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INSTALL report for oncomix on tokay1

This page was generated on 2020-04-15 12:29:26 -0400 (Wed, 15 Apr 2020).

Package 1186/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
oncomix 1.8.0
Daniel Pique
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/oncomix
Branch: RELEASE_3_10
Last Commit: 53dbab9
Last Changed Date: 2019-10-29 13:10:53 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: oncomix
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/oncomix_1.8.0.tar.gz && rm -rf oncomix.buildbin-libdir && mkdir oncomix.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=oncomix.buildbin-libdir oncomix_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL oncomix_1.8.0.zip && rm oncomix_1.8.0.tar.gz oncomix_1.8.0.zip
StartedAt: 2020-04-14 20:17:29 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 20:18:14 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 45.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/oncomix_1.8.0.tar.gz && rm -rf oncomix.buildbin-libdir && mkdir oncomix.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=oncomix.buildbin-libdir oncomix_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL oncomix_1.8.0.zip && rm oncomix_1.8.0.tar.gz oncomix_1.8.0.zip
###
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install for i386

* installing *source* package 'oncomix' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'oncomix'
    finding HTML links ... done
    exprNmlIsof                             html  
    exprTumIsof                             html  
    mixModelParams                          html  
    oncoMixBimodal                          html  
    oncoMixIdeal                            html  
    oncoMixTraditionalDE                    html  
    plotGeneHist                            html  
    queryRes                                html  
    scatterMixPlot                          html  
    toMatrix                                html  
    topGeneQuants                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'oncomix' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'oncomix' as oncomix_1.8.0.zip
* DONE (oncomix)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'oncomix' successfully unpacked and MD5 sums checked