Back to Multiple platform build/check report for BioC 3.10
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

BUILD BIN report for miRspongeR on tokay1

This page was generated on 2020-04-15 12:28:53 -0400 (Wed, 15 Apr 2020).

Package 1061/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
miRspongeR 1.12.0
Junpeng Zhang
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/miRspongeR
Branch: RELEASE_3_10
Last Commit: f115a40
Last Changed Date: 2019-10-29 13:10:40 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: miRspongeR
Version: 1.12.0
Command: rm -rf miRspongeR.buildbin-libdir && mkdir miRspongeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRspongeR.buildbin-libdir miRspongeR_1.12.0.tar.gz
StartedAt: 2020-04-15 09:11:23 -0400 (Wed, 15 Apr 2020)
EndedAt: 2020-04-15 09:12:05 -0400 (Wed, 15 Apr 2020)
EllapsedTime: 41.8 seconds
RetCode: 0
Status:  OK  
PackageFile: miRspongeR_1.12.0.zip
PackageFileSize: 686.9 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf miRspongeR.buildbin-libdir && mkdir miRspongeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRspongeR.buildbin-libdir miRspongeR_1.12.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'miRspongeR' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c complex.c -o complex.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o miRspongeR.dll tmp.def complex.o registerDynamicSymbol.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/miRspongeR.buildbin-libdir/00LOCK-miRspongeR/00new/miRspongeR/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'miRspongeR'
    finding HTML links ... done
    integrateMethod                         html  
    moduleDEA                               html  
    moduleFEA                               html  
    moduleSurvival                          html  
    netModule                               html  
    querymiRTargetbinding                   html  
    spongeMethod                            html  
    spongeValidate                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'miRspongeR' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c complex.c -o complex.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o miRspongeR.dll tmp.def complex.o registerDynamicSymbol.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/miRspongeR.buildbin-libdir/miRspongeR/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'miRspongeR' as miRspongeR_1.12.0.zip
* DONE (miRspongeR)