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BUILD BIN report for metavizr on tokay1

This page was generated on 2020-04-15 12:28:22 -0400 (Wed, 15 Apr 2020).

Package 1009/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
metavizr 1.10.0
Hector Corrada Bravo
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/metavizr
Branch: RELEASE_3_10
Last Commit: e8518fa
Last Changed Date: 2019-10-29 13:10:25 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: metavizr
Version: 1.10.0
Command: rm -rf metavizr.buildbin-libdir && mkdir metavizr.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metavizr.buildbin-libdir metavizr_1.10.0.tar.gz
StartedAt: 2020-04-15 09:08:21 -0400 (Wed, 15 Apr 2020)
EndedAt: 2020-04-15 09:09:31 -0400 (Wed, 15 Apr 2020)
EllapsedTime: 69.7 seconds
RetCode: 0
Status:  OK  
PackageFile: metavizr_1.10.0.zip
PackageFileSize: 1.707 MiB

Command output

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### Running command:
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###   rm -rf metavizr.buildbin-libdir && mkdir metavizr.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metavizr.buildbin-libdir metavizr_1.10.0.tar.gz
###
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install for i386

* installing *source* package 'metavizr' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'S4Vectors::as.data.frame' by 'git2r::as.data.frame' when loading 'epivizrStandalone'
Warning: replacing previous import 'S4Vectors::head' by 'git2r::head' when loading 'epivizrStandalone'
Warning: replacing previous import 'S4Vectors::merge' by 'git2r::merge' when loading 'epivizrStandalone'
** help
*** installing help indices
  converting help for package 'metavizr'
    finding HTML links ... done
    EpivizMetagenomicsData-class            html  
    EpivizMetagenomicsDataInnerNodes-class
                                            html  
    EpivizMetagenomicsDataTimeSeries-class
                                            html  
    MetavizApp-class                        html  
    MetavizGraph-class                      html  
    MetavizGraphInnerNodes-class            html  
    buildMetavizGraph                       html  
    buildMetavizGraphInnerNodes             html  
    generateSelection                       html  
    metavizControl                          html  
    register-MRexperiment-method            html  
    register-phyloseq-method                html  
    finding level-2 HTML links ... done

    replaceNAFeatures                       html  
    setMetavizStandalone                    html  
    startMetaviz                            html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpgBFXMv/R.INSTALL3604157d5493/metavizr/man/startMetaviz.Rd:5: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpgBFXMv/R.INSTALL3604157d5493/metavizr/man/startMetaviz.Rd:21: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpgBFXMv/R.INSTALL3604157d5493/metavizr/man/startMetaviz.Rd:18: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpgBFXMv/R.INSTALL3604157d5493/metavizr/man/startMetaviz.Rd:30: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic
    startMetavizStandalone                  html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpgBFXMv/R.INSTALL3604157d5493/metavizr/man/startMetavizStandalone.Rd:5: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpgBFXMv/R.INSTALL3604157d5493/metavizr/man/startMetavizStandalone.Rd:22: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic
    validateObject                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'S4Vectors::as.data.frame' by 'git2r::as.data.frame' when loading 'epivizrStandalone'
Warning: replacing previous import 'S4Vectors::head' by 'git2r::head' when loading 'epivizrStandalone'
Warning: replacing previous import 'S4Vectors::merge' by 'git2r::merge' when loading 'epivizrStandalone'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'S4Vectors::as.data.frame' by 'git2r::as.data.frame' when loading 'epivizrStandalone'
Warning: replacing previous import 'S4Vectors::head' by 'git2r::head' when loading 'epivizrStandalone'
Warning: replacing previous import 'S4Vectors::merge' by 'git2r::merge' when loading 'epivizrStandalone'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'metavizr' ...
** testing if installed package can be loaded
Warning: replacing previous import 'S4Vectors::merge' by 'git2r::merge' when loading 'epivizrStandalone'
Warning: replacing previous import 'S4Vectors::head' by 'git2r::head' when loading 'epivizrStandalone'
Warning: replacing previous import 'S4Vectors::as.data.frame' by 'git2r::as.data.frame' when loading 'epivizrStandalone'
* MD5 sums
packaged installation of 'metavizr' as metavizr_1.10.0.zip
* DONE (metavizr)