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BUILD BIN report for mbkmeans on tokay1

This page was generated on 2020-04-15 12:32:12 -0400 (Wed, 15 Apr 2020).

Package 969/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mbkmeans 1.2.0
Davide Risso
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/mbkmeans
Branch: RELEASE_3_10
Last Commit: 6ea1350
Last Changed Date: 2019-10-29 13:11:37 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: mbkmeans
Version: 1.2.0
Command: rm -rf mbkmeans.buildbin-libdir && mkdir mbkmeans.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mbkmeans.buildbin-libdir mbkmeans_1.2.0.tar.gz
StartedAt: 2020-04-15 09:06:10 -0400 (Wed, 15 Apr 2020)
EndedAt: 2020-04-15 09:07:41 -0400 (Wed, 15 Apr 2020)
EllapsedTime: 90.7 seconds
RetCode: 0
Status:  OK  
PackageFile: mbkmeans_1.2.0.zip
PackageFileSize: 958.6 KiB

Command output

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### Running command:
###
###   rm -rf mbkmeans.buildbin-libdir && mkdir mbkmeans.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mbkmeans.buildbin-libdir mbkmeans_1.2.0.tar.gz
###
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install for i386

* installing *source* package 'mbkmeans' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rhdf5lib/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/beachmat/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rhdf5lib/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/beachmat/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c mini_batch.cpp -o mini_batch.o
In file included from mini_batch.cpp:3:0:
C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include/ClusterRHeader.h: In member function 'arma::mat clustR::ClustHeader::KMEANS_arma(arma::mat&, int, int, bool, std::string, Rcpp::Nullable<Rcpp::Matrix<14> >, int)':
C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include/ClusterRHeader.h:837:14: warning: variable 'status' set but not used [-Wunused-but-set-variable]
         bool status;
              ^
C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include/ClusterRHeader.h: In member function 'Rcpp::List clustR::ClustHeader::GMM_arma(arma::mat&, int, std::string, std::string, int, int, bool, double, int)':
C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include/ClusterRHeader.h:1433:14: warning: variable 'status' set but not used [-Wunused-but-set-variable]
         bool status;
              ^
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o mbkmeans.dll tmp.def RcppExports.o mini_batch.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/mbkmeans.buildbin-libdir/00LOCK-mbkmeans/00new/mbkmeans/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'mbkmeans'
    finding HTML links ... done
    blocksize                               html  
    compute_wcss                            html  
    mbkmeans                                html  
    mini_batch                              html  
    predict_mini_batch                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'mbkmeans' ...
** libs
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rhdf5lib/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/beachmat/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rhdf5lib/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/beachmat/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c mini_batch.cpp -o mini_batch.o
In file included from mini_batch.cpp:3:0:
C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include/ClusterRHeader.h: In member function 'arma::mat clustR::ClustHeader::KMEANS_arma(arma::mat&, int, int, bool, std::string, Rcpp::Nullable<Rcpp::Matrix<14> >, int)':
C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include/ClusterRHeader.h:837:14: warning: variable 'status' set but not used [-Wunused-but-set-variable]
         bool status;
              ^
C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include/ClusterRHeader.h: In member function 'Rcpp::List clustR::ClustHeader::GMM_arma(arma::mat&, int, std::string, std::string, int, int, bool, double, int)':
C:/Users/biocbuild/bbs-3.10-bioc/R/library/ClusterR/include/ClusterRHeader.h:1433:14: warning: variable 'status' set but not used [-Wunused-but-set-variable]
         bool status;
              ^
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o mbkmeans.dll tmp.def RcppExports.o mini_batch.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/mbkmeans.buildbin-libdir/mbkmeans/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mbkmeans' as mbkmeans_1.2.0.zip
* DONE (mbkmeans)