Back to Multiple platform build/check report for BioC 3.10
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

INSTALL report for idr2d on tokay1

This page was generated on 2020-04-15 12:33:06 -0400 (Wed, 15 Apr 2020).

Package 828/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
idr2d 1.0.4
Konstantin Krismer
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/idr2d
Branch: RELEASE_3_10
Last Commit: 484fd72
Last Changed Date: 2020-03-28 18:03:06 -0400 (Sat, 28 Mar 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: idr2d
Version: 1.0.4
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/idr2d_1.0.4.tar.gz && rm -rf idr2d.buildbin-libdir && mkdir idr2d.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=idr2d.buildbin-libdir idr2d_1.0.4.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL idr2d_1.0.4.zip && rm idr2d_1.0.4.tar.gz idr2d_1.0.4.zip
StartedAt: 2020-04-14 19:33:26 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:34:13 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 47.4 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/idr2d_1.0.4.tar.gz && rm -rf idr2d.buildbin-libdir && mkdir idr2d.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=idr2d.buildbin-libdir idr2d_1.0.4.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL idr2d_1.0.4.zip && rm idr2d_1.0.4.tar.gz idr2d_1.0.4.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  794k  100  794k    0     0  2665k      0 --:--:-- --:--:-- --:--:-- 2692k

install for i386

* installing *source* package 'idr2d' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'idr2d'
    finding HTML links ... done
    calculate_midpoint_distance1d           html  
    calculate_midpoint_distance2d           html  
    calculate_relative_overlap1d            html  
    calculate_relative_overlap2d            html  
    chiapet                                 html  
    chipseq                                 html  
    determine_anchor_overlap                html  
    draw_hic_contact_map                    html  
    draw_idr_distribution_histogram         html  
    draw_rank_idr_scatterplot               html  
    draw_value_idr_scatterplot              html  
    establish_bijection                     html  
    establish_bijection1d                   html  
    establish_bijection2d                   html  
    establish_overlap1d                     html  
    establish_overlap2d                     html  
    estimate_idr                            html  
    estimate_idr1d                          html  
    estimate_idr2d                          html  
    estimate_idr2d_hic                      html  
    hic                                     html  
    parse_hic_pro_matrix                    html  
    parse_juicer_matrix                     html  
    preprocess                              html  
    remove_nonstandard_chromosomes1d        html  
    remove_nonstandard_chromosomes2d        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'idr2d' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'idr2d' as idr2d_1.0.4.zip
* DONE (idr2d)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'idr2d' successfully unpacked and MD5 sums checked