Aedin Culhane
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/iBBiG |
| Branch: RELEASE_3_10 |
| Last Commit: 916b261 |
| Last Changed Date: 2019-10-29 13:08:30 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:20:37 -0400 (Wed, 15 Apr 2020).
| Package 812/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| iBBiG 1.30.0 Aedin Culhane
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: iBBiG |
| Version: 1.30.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/iBBiG_1.30.0.tar.gz && rm -rf iBBiG.buildbin-libdir && mkdir iBBiG.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iBBiG.buildbin-libdir iBBiG_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL iBBiG_1.30.0.zip && rm iBBiG_1.30.0.tar.gz iBBiG_1.30.0.zip |
| StartedAt: 2020-04-14 18:59:03 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 18:59:31 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 27.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/iBBiG_1.30.0.tar.gz && rm -rf iBBiG.buildbin-libdir && mkdir iBBiG.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iBBiG.buildbin-libdir iBBiG_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL iBBiG_1.30.0.zip && rm iBBiG_1.30.0.tar.gz iBBiG_1.30.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 18911 100 18911 0 0 489k 0 --:--:-- --:--:-- --:--:-- 543k
install for i386
* installing *source* package 'iBBiG' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=core2 -c R_init_iBBiG.c -o R_init_iBBiG.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=core2 -c iBBiG.c -o iBBiG.o
iBBiG.c: In function 'clusterCovsC':
iBBiG.c:300:6: warning: implicit declaration of function 'time' [-Wimplicit-function-declaration]
srand((unsigned)time(NULL));
^
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o iBBiG.dll tmp.def R_init_iBBiG.o iBBiG.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/iBBiG.buildbin-libdir/00LOCK-iBBiG/00new/iBBiG/libs/i386
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'iBBiG'
finding HTML links ... done
iBBiG-class html
finding level-2 HTML links ... done
iBBiG-package html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpApk3SO/R.INSTALL172c6f945903/iBBiG/man/iBBiG-package.Rd:44: file link 'biclust' in package 'biclust' does not exist and so has been treated as a topic
iBBiG html
makeArtificial html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'iBBiG' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=core2 -c R_init_iBBiG.c -o R_init_iBBiG.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=core2 -c iBBiG.c -o iBBiG.o
iBBiG.c: In function 'clusterCovsC':
iBBiG.c:300:6: warning: implicit declaration of function 'time' [-Wimplicit-function-declaration]
srand((unsigned)time(NULL));
^
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o iBBiG.dll tmp.def R_init_iBBiG.o iBBiG.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/iBBiG.buildbin-libdir/iBBiG/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'iBBiG' as iBBiG_1.30.0.zip
* DONE (iBBiG)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'iBBiG' successfully unpacked and MD5 sums checked