Britta Velten
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/graper |
| Branch: RELEASE_3_10 |
| Last Commit: f14bae8 |
| Last Changed Date: 2019-10-29 13:11:28 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:15:05 -0400 (Wed, 15 Apr 2020).
| Package 739/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| graper 1.2.0 Britta Velten
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | [ OK ] | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: graper |
| Version: 1.2.0 |
| Command: /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.10-bioc/R/library --no-vignettes --timings graper_1.2.0.tar.gz |
| StartedAt: 2020-04-15 06:13:00 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 06:14:05 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 65.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.10-bioc/R/library --no-vignettes --timings graper_1.2.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.10-bioc/meat/graper.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.2.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 5.4Mb
sub-directories of 1Mb or more:
libs 5.2Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.10-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.10-bioc/R/library’ * installing *source* package ‘graper’ ... ** using staged installation ** libs g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.10-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -L/home/biocbuild/bbs-3.10-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.10-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.10-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.10-bioc/R/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 3.6.3 (2020-02-29) -- "Holding the Windsock"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-882.19
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-592.98
ELB improved by 289.21
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-531.722
ELB improved by 61.2582
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.081
ELB improved by 44.6408
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.849
ELB improved by 21.2322
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.767
ELB improved by 8.08223
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.204
ELB improved by 4.56236
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.496
ELB improved by 3.70828
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.813
ELB improved by 3.68264
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.919
ELB improved by 3.89437
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.881
ELB improved by 4.03752
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.021
ELB improved by 3.8607
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.739
ELB improved by 3.28179
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.239
ELB improved by 2.50014
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.437
ELB improved by 1.80222
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.116
ELB improved by 1.32098
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.076
ELB improved by 1.03998
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.184
ELB improved by 0.892097
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.364
ELB improved by 0.819307
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.578
ELB improved by 0.786585
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.801
ELB improved by 0.776497
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.019
ELB improved by 0.782179
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.217
ELB improved by 0.802391
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.379
ELB improved by 0.837409
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.495
ELB improved by 0.883957
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.564
ELB improved by 0.931505
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.595
ELB improved by 0.968877
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.6
ELB improved by 0.994709
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.59
ELB improved by 1.00969
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.585
ELB improved by 1.00534
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.616
ELB improved by 0.968601
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.724
ELB improved by 0.891968
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.945
ELB improved by 0.779659
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.298
ELB improved by 0.64696
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.784
ELB improved by 0.513477
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.389
ELB improved by 0.394932
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.091
ELB improved by 0.29893
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.865
ELB improved by 0.225876
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.692
ELB improved by 0.17226
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.559
ELB improved by 0.133531
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.453
ELB improved by 0.1056
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.368
ELB improved by 0.0853034
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.298
ELB improved by 0.070361
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.238
ELB improved by 0.0591816
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.188
ELB improved by 0.0506696
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.144
ELB improved by 0.0440734
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.105
ELB improved by 0.0388773
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.07
ELB improved by 0.0347269
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.039
ELB improved by 0.0313794
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.01
ELB improved by 0.0286706
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.984
ELB improved by 0.0264944
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.959
ELB improved by 0.0247905
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.935
ELB improved by 0.0235404
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.912
ELB improved by 0.0227697
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.89
ELB improved by 0.0225614
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.867
ELB improved by 0.0230834
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.842
ELB improved by 0.024642
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.814
ELB improved by 0.0277855
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.781
ELB improved by 0.0335016
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.737
ELB improved by 0.0435865
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.676
ELB improved by 0.0612428
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.585
ELB improved by 0.091529
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.445
ELB improved by 0.139227
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.246
ELB improved by 0.198833
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.003
ELB improved by 0.243798
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.756
ELB improved by 0.246426
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.543
ELB improved by 0.213039
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.363
ELB improved by 0.17977
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.184
ELB improved by 0.179015
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.951
ELB improved by 0.233768
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.603
ELB improved by 0.348057
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.19
ELB improved by 0.412488
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.868
ELB improved by 0.322279
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.671
ELB improved by 0.19718
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.55
ELB improved by 0.120692
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.465
ELB improved by 0.0852861
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.393
ELB improved by 0.0714613
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.325
ELB improved by 0.0677193
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.257
ELB improved by 0.0686283
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.185
ELB improved by 0.0722069
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.106
ELB improved by 0.0782502
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.02
ELB improved by 0.085959
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.929
ELB improved by 0.0914637
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.84
ELB improved by 0.0893048
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.761
ELB improved by 0.0783764
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.698
ELB improved by 0.0632341
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.649
ELB improved by 0.0485868
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.613
ELB improved by 0.0364101
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.586
ELB improved by 0.0270693
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.566
ELB improved by 0.0203777
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.55
ELB improved by 0.0158674
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.537
ELB improved by 0.0129475
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.526
ELB improved by 0.0110778
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.516
ELB improved by 0.00985874
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-874.262
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-584.44
ELB improved by 289.823
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-525.102
ELB improved by 59.3378
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.401
ELB improved by 39.7007
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.649
ELB improved by 17.7519
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.466
ELB improved by 8.18331
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.045
ELB improved by 5.42053
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.292
ELB improved by 4.75364
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.668
ELB improved by 4.62388
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.128
ELB improved by 4.54013
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.927
ELB improved by 4.20062
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.44
ELB improved by 3.48749
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.833
ELB improved by 2.6068
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.982
ELB improved by 1.85083
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.669
ELB improved by 1.31287
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.72
ELB improved by 0.948698
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.014
ELB improved by 0.706552
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.465
ELB improved by 0.548463
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.02
ELB improved by 0.445664
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.642
ELB improved by 0.37798
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.309
ELB improved by 0.332413
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.008
ELB improved by 0.300894
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.73
ELB improved by 0.278443
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.468
ELB improved by 0.261969
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.218
ELB improved by 0.249513
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.979
ELB improved by 0.23978
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.747
ELB improved by 0.231853
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.522
ELB improved by 0.225042
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.303
ELB improved by 0.218802
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.09
ELB improved by 0.212695
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.884
ELB improved by 0.206379
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.684
ELB improved by 0.199612
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.492
ELB improved by 0.192244
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.308
ELB improved by 0.184222
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.132
ELB improved by 0.175572
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.966
ELB improved by 0.166391
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.809
ELB improved by 0.156821
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.662
ELB improved by 0.147028
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.525
ELB improved by 0.137185
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.397
ELB improved by 0.127457
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.279
ELB improved by 0.117986
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.171
ELB improved by 0.10889
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.07
ELB improved by 0.100256
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.978
ELB improved by 0.0921479
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.894
ELB improved by 0.0846012
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.816
ELB improved by 0.0776319
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.745
ELB improved by 0.0712386
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.679
ELB improved by 0.0654065
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.619
ELB improved by 0.0601111
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.564
ELB improved by 0.0553214
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.513
ELB improved by 0.0510025
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.466
ELB improved by 0.0471179
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.422
ELB improved by 0.0436306
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.382
ELB improved by 0.0405049
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.344
ELB improved by 0.037707
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.309
ELB improved by 0.0352055
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.276
ELB improved by 0.0329716
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.245
ELB improved by 0.0309794
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.215
ELB improved by 0.0292057
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.188
ELB improved by 0.0276303
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.162
ELB improved by 0.0262351
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.137
ELB improved by 0.0250049
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.113
ELB improved by 0.0239265
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.09
ELB improved by 0.0229892
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.068
ELB improved by 0.022184
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.046
ELB improved by 0.0215044
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.025
ELB improved by 0.0209457
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.005
ELB improved by 0.0205059
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.984
ELB improved by 0.0201853
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.964
ELB improved by 0.0199873
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.944
ELB improved by 0.0199195
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.924
ELB improved by 0.0199944
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.904
ELB improved by 0.0202319
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.884
ELB improved by 0.0206622
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.862
ELB improved by 0.0213318
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.84
ELB improved by 0.0223122
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.816
ELB improved by 0.0237177
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.79
ELB improved by 0.0257362
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.762
ELB improved by 0.0286929
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.729
ELB improved by 0.0331809
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.688
ELB improved by 0.0403488
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.636
ELB improved by 0.0525487
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.561
ELB improved by 0.0747166
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.445
ELB improved by 0.116394
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.256
ELB improved by 0.188871
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.977
ELB improved by 0.278774
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.652
ELB improved by 0.325232
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.348
ELB improved by 0.303322
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.092
ELB improved by 0.256533
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.878
ELB improved by 0.213913
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.699
ELB improved by 0.179229
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.548
ELB improved by 0.150614
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.422
ELB improved by 0.126429
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.316
ELB improved by 0.105678
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.228
ELB improved by 0.0877844
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.156
ELB improved by 0.0723949
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.097
ELB improved by 0.0592725
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.048
ELB improved by 0.048235
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.009
ELB improved by 0.0391088
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.977
ELB improved by 0.0317024
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.952
ELB improved by 0.0258031
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.931
ELB improved by 0.0211906
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.913
ELB improved by 0.0176556
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.898
ELB improved by 0.0150137
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.885
ELB improved by 0.0131142
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.873
ELB improved by 0.0118464
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.862
ELB improved by 0.011145
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.851
ELB improved by 0.0110005
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.839
ELB improved by 0.0114809
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.826
ELB improved by 0.0127793
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.811
ELB improved by 0.0153211
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.791
ELB improved by 0.0200245
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.762
ELB improved by 0.0289885
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.715
ELB improved by 0.0475482
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.623
ELB improved by 0.091284
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.411
ELB improved by 0.21195
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.845
ELB improved by 0.565945
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.588
ELB improved by 1.25765
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.863
ELB improved by 1.72502
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.396
ELB improved by 1.46641
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.515
ELB improved by 0.88156
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.034
ELB improved by 0.481086
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.724
ELB improved by 0.309741
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.45
ELB improved by 0.273888
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.168
ELB improved by 0.282412
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.906
ELB improved by 0.261877
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.699
ELB improved by 0.2064
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.548
ELB improved by 0.151057
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.441
ELB improved by 0.10769
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.367
ELB improved by 0.0735218
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.32
ELB improved by 0.0475151
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.29
ELB improved by 0.0297537
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.271
ELB improved by 0.0187768
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.259
ELB improved by 0.01232
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.25
ELB improved by 0.0085386
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-906.132
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.71
ELB improved by 317.421
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-525.071
ELB improved by 63.6391
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.603
ELB improved by 38.4676
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.241
ELB improved by 15.3628
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.791
ELB improved by 6.44941
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.648
ELB improved by 4.14278
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.263
ELB improved by 3.38581
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.14
ELB improved by 3.12233
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.151
ELB improved by 2.98952
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.299
ELB improved by 2.85182
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.677
ELB improved by 2.62224
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.411
ELB improved by 2.26534
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.573
ELB improved by 1.83815
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.137
ELB improved by 1.436
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.024
ELB improved by 1.11313
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.149
ELB improved by 0.874876
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.441
ELB improved by 0.708033
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.846
ELB improved by 0.595665
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.323
ELB improved by 0.522707
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.844
ELB improved by 0.478799
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.387
ELB improved by 0.457114
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.934
ELB improved by 0.452698
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.472
ELB improved by 0.462261
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.987
ELB improved by 0.484654
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.466
ELB improved by 0.521574
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.888
ELB improved by 0.578138
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.227
ELB improved by 0.660648
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.462
ELB improved by 0.764668
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.601
ELB improved by 0.860806
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.679
ELB improved by 0.922309
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.717
ELB improved by 0.96232
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.71
ELB improved by 1.00652
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.64
ELB improved by 1.07059
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.476
ELB improved by 1.16391
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.186
ELB improved by 1.29024
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.744
ELB improved by 1.44162
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.157
ELB improved by 1.58655
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.496
ELB improved by 1.66116
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.893
ELB improved by 1.60343
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.468
ELB improved by 1.42444
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.288
ELB improved by 1.18037
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.387
ELB improved by 0.900913
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.748
ELB improved by 0.638861
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.293
ELB improved by 0.455567
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.936
ELB improved by 0.356983
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.615
ELB improved by 0.321109
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.301
ELB improved by 0.313665
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.014
ELB improved by 0.287268
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.79
ELB improved by 0.22374
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.637
ELB improved by 0.153379
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.534
ELB improved by 0.102567
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.462
ELB improved by 0.0720071
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.408
ELB improved by 0.0538452
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.366
ELB improved by 0.0423668
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.331
ELB improved by 0.0346259
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.302
ELB improved by 0.0291447
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.277
ELB improved by 0.0251282
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.255
ELB improved by 0.0221109
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.235
ELB improved by 0.0197991
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.217
ELB improved by 0.0179958
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.2
ELB improved by 0.0165621
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.185
ELB improved by 0.0153959
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.171
ELB improved by 0.0144194
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.157
ELB improved by 0.0135719
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.144
ELB improved by 0.012806
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.132
ELB improved by 0.0120864
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.121
ELB improved by 0.0113886
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.11
ELB improved by 0.0106994
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.1
ELB improved by 0.0100154
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.091
ELB improved by 0.00934117
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-828.649
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-562.884
ELB improved by 265.766
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-502.42
ELB improved by 60.4631
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.885
ELB improved by 39.5355
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.241
ELB improved by 16.6435
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.49
ELB improved by 6.75133
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.332
ELB improved by 4.15833
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.966
ELB improved by 3.36604
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.712
ELB improved by 3.25377
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.285
ELB improved by 3.42703
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.604
ELB improved by 3.68069
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.788
ELB improved by 3.81618
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.169
ELB improved by 3.61909
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.143
ELB improved by 3.02575
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.91
ELB improved by 2.23313
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.394
ELB improved by 1.51628
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.386
ELB improved by 1.00768
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.695
ELB improved by 0.691166
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.194
ELB improved by 0.501333
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.809
ELB improved by 0.384346
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.501
ELB improved by 0.308134
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.246
ELB improved by 0.255451
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.029
ELB improved by 0.217067
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.841
ELB improved by 0.18787
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.676
ELB improved by 0.164896
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.53
ELB improved by 0.146341
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.398
ELB improved by 0.131051
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.28
ELB improved by 0.118256
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.173
ELB improved by 0.107416
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.075
ELB improved by 0.0981386
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.985
ELB improved by 0.0901306
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.901
ELB improved by 0.0831663
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.824
ELB improved by 0.0770684
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.753
ELB improved by 0.0716961
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.686
ELB improved by 0.0669355
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.623
ELB improved by 0.062694
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.564
ELB improved by 0.0588955
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.509
ELB improved by 0.0554772
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.456
ELB improved by 0.0523873
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.407
ELB improved by 0.0495825
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.36
ELB improved by 0.0470268
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.315
ELB improved by 0.0446905
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.272
ELB improved by 0.0425487
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.232
ELB improved by 0.040581
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.193
ELB improved by 0.0387705
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.156
ELB improved by 0.0371037
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.12
ELB improved by 0.0355694
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.086
ELB improved by 0.0341593
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.053
ELB improved by 0.032867
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.022
ELB improved by 0.0316881
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.991
ELB improved by 0.03062
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.961
ELB improved by 0.0296623
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.933
ELB improved by 0.0288163
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.904
ELB improved by 0.0280857
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.877
ELB improved by 0.0274767
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.85
ELB improved by 0.0269985
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.823
ELB improved by 0.0266644
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.797
ELB improved by 0.0264926
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.77
ELB improved by 0.0265079
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.744
ELB improved by 0.0267436
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.716
ELB improved by 0.027244
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.688
ELB improved by 0.0280679
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.659
ELB improved by 0.0292917
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.628
ELB improved by 0.0310122
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.595
ELB improved by 0.0333468
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.558
ELB improved by 0.0364267
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.518
ELB improved by 0.0403779
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.473
ELB improved by 0.0452838
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.421
ELB improved by 0.0511306
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.364
ELB improved by 0.0577578
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.299
ELB improved by 0.0648586
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.227
ELB improved by 0.0720754
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.148
ELB improved by 0.0791606
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.061
ELB improved by 0.0860939
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.968
ELB improved by 0.0930622
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.868
ELB improved by 0.100341
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.76
ELB improved by 0.108191
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.643
ELB improved by 0.116829
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.517
ELB improved by 0.126447
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.379
ELB improved by 0.137239
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.23
ELB improved by 0.149398
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.067
ELB improved by 0.163086
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.888
ELB improved by 0.17837
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.693
ELB improved by 0.195126
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.48
ELB improved by 0.212941
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.249
ELB improved by 0.231027
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.001
ELB improved by 0.248225
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.738
ELB improved by 0.263163
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.463
ELB improved by 0.274607
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.181
ELB improved by 0.281979
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.895
ELB improved by 0.286048
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.605
ELB improved by 0.289943
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.304
ELB improved by 0.301363
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.966
ELB improved by 0.33849
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.523
ELB improved by 0.442279
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.868
ELB improved by 0.65566
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.039
ELB improved by 0.829125
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.336
ELB improved by 0.70237
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.879
ELB improved by 0.457464
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.586
ELB improved by 0.293143
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.387
ELB improved by 0.19832
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.248
ELB improved by 0.138948
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.149
ELB improved by 0.0987998
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.079
ELB improved by 0.0706243
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.028
ELB improved by 0.0506571
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.992
ELB improved by 0.0365586
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.965
ELB improved by 0.0266708
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.945
ELB improved by 0.0197665
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.93
ELB improved by 0.0149463
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.919
ELB improved by 0.0115677
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.909
ELB improved by 0.00918189
ELB converged
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 24 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 0 ]
>
> proc.time()
user system elapsed
3.132 0.120 3.281
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.072 | 0.004 | 0.110 | |
| getPIPs | 0.060 | 0.004 | 0.066 | |
| graper | 0.100 | 0.004 | 0.108 | |
| makeExampleData | 0.012 | 0.000 | 0.013 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.015 | |
| plotELBO | 0.528 | 0.012 | 0.542 | |
| plotGroupPenalties | 1.004 | 0.024 | 1.031 | |
| plotPosterior | 1.036 | 0.016 | 1.062 | |
| predict.graper | 2.876 | 0.040 | 2.996 | |
| print.graper | 0.072 | 0.004 | 0.077 | |