Back to Multiple platform build/check report for BioC 3.10
ABCDE[F]GHIJKLMNOPQRSTUVWXYZ

INSTALL report for flowcatchR on tokay1

This page was generated on 2020-04-15 12:23:52 -0400 (Wed, 15 Apr 2020).

Package 581/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowcatchR 1.20.0
Federico Marini
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/flowcatchR
Branch: RELEASE_3_10
Last Commit: 6771dc2
Last Changed Date: 2019-10-29 13:09:05 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: flowcatchR
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/flowcatchR_1.20.0.tar.gz && rm -rf flowcatchR.buildbin-libdir && mkdir flowcatchR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowcatchR.buildbin-libdir flowcatchR_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL flowcatchR_1.20.0.zip && rm flowcatchR_1.20.0.tar.gz flowcatchR_1.20.0.zip
StartedAt: 2020-04-14 19:21:11 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:22:05 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 54.5 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/flowcatchR_1.20.0.tar.gz && rm -rf flowcatchR.buildbin-libdir && mkdir flowcatchR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowcatchR.buildbin-libdir flowcatchR_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL flowcatchR_1.20.0.zip && rm flowcatchR_1.20.0.tar.gz flowcatchR_1.20.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  9.9M  100  9.9M    0     0  61.7M      0 --:--:-- --:--:-- --:--:-- 63.5M

install for i386

* installing *source* package 'flowcatchR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'flowcatchR'
    finding HTML links ... done
    Frames-class                            html  
    Frames                                  html  
    KinematicsFeatures-class                html  
    KinematicsFeaturesSet-class             html  
    LinkedParticleSet-class                 html  
    MesenteriumSubset                       html  
    ParticleSet-class                       html  
    TrajectorySet-class                     html  
    add.contours                            html  
    addParticles                            html  
    axesInfo                                html  
    candidate.platelets                     html  
    channel.Frames                          html  
    computeMSD                              html  
    crop.Frames                             html  
    finding level-2 HTML links ... done

    export.Frames                           html  
    export.particles                        html  
    extractKinematics.traj                  html  
    flowcatchR-pkg                          html  
    initialize.LinkedParticleSet            html  
    inspect.Frames                          html  
    kinematics                              html  
    length.Frames                           html  
    link.particles                          html  
    matchTrajToParticles                    html  
    normalizeFrames                         html  
    particles                               html  
    penaltyFunctionGenerator                html  
    plot.TrajectorySet                      html  
    plot2D.TrajectorySet                    html  
    preprocess.Frames                       html  
    read.Frames                             html  
    read.particles                          html  
    repmat                                  html  
    rotate.Frames                           html  
    select.Frames                           html  
    select.particles                        html  
    shinyFlow                               html  
    show-Frames-method                      html  
    show-KinematicsFeatures-method          html  
    show-KinematicsFeaturesSet-method       html  
    show-LinkedParticleSet-method           html  
    show-ParticleSet-method                 html  
    show-TrajectorySet-method               html  
    snap                                    html  
    toCartesianCoords                       html  
    toPolarCoords                           html  
    trajectories                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'flowcatchR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'flowcatchR' as flowcatchR_1.20.0.zip
* DONE (flowcatchR)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'flowcatchR' successfully unpacked and MD5 sums checked