Package: fabia

Version: 2.32.0

Command: /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL fabia

StartedAt: 2020-04-14 18:06:31 -0400 (Tue, 14 Apr 2020)

EndedAt: 2020-04-14 18:06:43 -0400 (Tue, 14 Apr 2020)

EllapsedTime: 11.4 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL fabia
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* installing to library ‘/home/biocbuild/bbs-3.10-bioc/R/library’
* installing *source* package ‘fabia’ ...
** using staged installation
'config' variable 'CPP' is deprecated
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking how to run the C preprocessor... gcc -E
configure: creating ./config.status
config.status: creating src/Makevars
** libs
gcc -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include  -I/usr/local/include -g -O2 -Wall -fpic  -g -O2  -Wall -c fabiac.c -o fabiac.o
fabiac.c: In function ‘fabic’:
fabiac.c:605:2: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  for (i1=K-1;i1>=0;i1--)
  ^~~
fabiac.c:613:6: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
      for (i3 = 0; i3 < K; i3++) {
      ^~~
gcc -shared -L/home/biocbuild/bbs-3.10-bioc/R/lib -L/usr/local/lib -o fabia.so fabiac.o -L/home/biocbuild/bbs-3.10-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.10-bioc/R/library/00LOCK-fabia/00new/fabia/libs
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fabia)