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INSTALL report for easyRNASeq on tokay1

This page was generated on 2020-04-15 12:20:24 -0400 (Wed, 15 Apr 2020).

Package 497/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
easyRNASeq 2.22.5
Nicolas Delhomme
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/easyRNASeq
Branch: RELEASE_3_10
Last Commit: e060332
Last Changed Date: 2020-01-24 17:02:02 -0400 (Fri, 24 Jan 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  ERROR  skipped 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
merida1 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: easyRNASeq
Version: 2.22.5
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/easyRNASeq_2.22.5.tar.gz && rm -rf easyRNASeq.buildbin-libdir && mkdir easyRNASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=easyRNASeq.buildbin-libdir easyRNASeq_2.22.5.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL easyRNASeq_2.22.5.zip && rm easyRNASeq_2.22.5.tar.gz easyRNASeq_2.22.5.zip
StartedAt: 2020-04-14 19:39:12 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:40:41 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 89.6 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/easyRNASeq_2.22.5.tar.gz && rm -rf easyRNASeq.buildbin-libdir && mkdir easyRNASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=easyRNASeq.buildbin-libdir easyRNASeq_2.22.5.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL easyRNASeq_2.22.5.zip && rm easyRNASeq_2.22.5.tar.gz easyRNASeq_2.22.5.zip
###
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100  123k  100  123k    0     0  1659k      0 --:--:-- --:--:-- --:--:-- 1745k

install for i386

* installing *source* package 'easyRNASeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'basename' from package 'base' in package 'easyRNASeq'
Creating a generic function for 'file.exists' from package 'base' in package 'easyRNASeq'
** help
*** installing help indices
  converting help for package 'easyRNASeq'
    finding HTML links ... done
    BiocFileCache-methods                   html  
    finding level-2 HTML links ... done

    DESeq-methods                           html  
    GenomicRanges-methods                   html  
    IRanges-methods                         html  
    Rsamtools-methods                       html  
    ShortRead-methods                       html  
    basename-methods                        html  
    easyRNASeq-AnnotParam-accessors         html  
    easyRNASeq-AnnotParam-class             html  
    easyRNASeq-AnnotParam                   html  
    easyRNASeq-BamFileList                  html  
    easyRNASeq-BamParam-accessors           html  
    easyRNASeq-BamParam-class               html  
    easyRNASeq-BamParam                     html  
    easyRNASeq-RnaSeqParam-accessors        html  
    easyRNASeq-RnaSeqParam-class            html  
    easyRNASeq-RnaSeqParam                  html  
    easyRNASeq-accessors                    html  
    easyRNASeq-annotation-internal-methods
                                            html  
    easyRNASeq-annotation-methods           html  
    easyRNASeq-class                        html  
    easyRNASeq-correction-methods           html  
    easyRNASeq-coverage-methods             html  
    easyRNASeq-datasets                     html  
    easyRNASeq-defunct-annotation-methods   html  
    easyRNASeq-defunct                      html  
    easyRNASeq-easyRNASeq                   html  
    easyRNASeq-global-variables             html  
    easyRNASeq-internal-AnnotParam-methods
                                            html  
    easyRNASeq-internal-methods             html  
    easyRNASeq-island-methods               html  
    easyRNASeq-package                      html  
    easyRNASeq-simpleRNASeq                 html  
    easyRNASeq-summarization-internal-methods
                                            html  
    easyRNASeq-summarization-methods        html  
    easyRNASeq-synthetic-transcripts        html  
    edgeR-methods                           html  
    file.exists-methods                     html  
    genomeIntervals-methods                 html  
    parallel-methods                        html  
    print-methods                           html  
    show-methods                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'easyRNASeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'easyRNASeq' as easyRNASeq_2.22.5.zip
* DONE (easyRNASeq)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'easyRNASeq' successfully unpacked and MD5 sums checked