Alvaro Cuadros-Inostroza
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/TargetSearch |
| Branch: RELEASE_3_10 |
| Last Commit: 25537d9 |
| Last Changed Date: 2019-12-05 11:55:05 -0400 (Thu, 05 Dec 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:35:54 -0400 (Wed, 15 Apr 2020).
| Package 1705/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| TargetSearch 1.42.1 Alvaro Cuadros-Inostroza
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] | |
| Package: TargetSearch |
| Version: 1.42.1 |
| Command: rm -rf TargetSearch.buildbin-libdir && mkdir TargetSearch.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh TargetSearch_1.42.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R TargetSearch.buildbin-libdir |
| StartedAt: 2020-04-15 08:54:53 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 08:55:45 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 52.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: TargetSearch_1.42.1.tgz |
| PackageFileSize: 1.04 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf TargetSearch.buildbin-libdir && mkdir TargetSearch.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh TargetSearch_1.42.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R TargetSearch.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=TargetSearch.buildbin-libdir TargetSearch_1.42.1.tar.gz' >>>>>>> * installing *source* package ‘TargetSearch’ ... ** using staged installation ** libs clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c Rinit.c -o Rinit.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c baseline.c -o baseline.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c detection.c -o detection.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c file.c -o file.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c find_peaks.c -o find_peaks.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c getLine.c -o getLine.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hpf.c -o hpf.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c matrix.c -o matrix.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c ncdf.c -o ncdf.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c peak.c -o peak.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils.c -o utils.o clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o TargetSearch.so Rinit.o baseline.o detection.o file.o find_peaks.o getLine.o hpf.o matrix.o ncdf.o peak.o utils.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.10-bioc/meat/TargetSearch.buildbin-libdir/00LOCK-TargetSearch/00new/TargetSearch/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TargetSearch) >>>>>>> >>>>>>> FIXING LINKS FOR TargetSearch.buildbin-libdir/TargetSearch/libs//TargetSearch.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgcc_s.1.dylib" "TargetSearch.buildbin-libdir/TargetSearch/libs//TargetSearch.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgfortran.3.dylib" "TargetSearch.buildbin-libdir/TargetSearch/libs//TargetSearch.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.5.2.dylib" "TargetSearch.buildbin-libdir/TargetSearch/libs//TargetSearch.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.dylib" "TargetSearch.buildbin-libdir/TargetSearch/libs//TargetSearch.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libquadmath.0.dylib" "TargetSearch.buildbin-libdir/TargetSearch/libs//TargetSearch.so"