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BUILD report for SharedObject on malbec1

This page was generated on 2020-04-15 12:16:11 -0400 (Wed, 15 Apr 2020).

Package 1577/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SharedObject 1.0.0
Jiefei Wang
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/SharedObject
Branch: RELEASE_3_10
Last Commit: 5a594e2
Last Changed Date: 2019-10-29 13:12:02 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK [ ERROR ] skipped 
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SharedObject
Version: 1.0.0
Command: /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SharedObject
StartedAt: 2020-04-14 23:49:31 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 23:49:59 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 28.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SharedObject
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* checking for file ‘SharedObject/DESCRIPTION’ ... OK
* preparing ‘SharedObject’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘quick_start_guide.Rmd’ using rmarkdown
terminate called after throwing an instance of 'Rcpp::LongjumpException'
Quitting from lines 49-61 (quick_start_guide.Rmd) 
Error: processing vignette 'quick_start_guide.Rmd' failed with diagnostics:
error reading from connection
--- failed re-building ‘quick_start_guide.Rmd’

SUMMARY: processing the following file failed:
  ‘quick_start_guide.Rmd’

Error: Vignette re-building failed.
Execution halted