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INSTALL report for Sconify on tokay1

This page was generated on 2020-04-15 12:30:07 -0400 (Wed, 15 Apr 2020).

Package 1541/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Sconify 1.6.0
Tyler J Burns
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/Sconify
Branch: RELEASE_3_10
Last Commit: 4aa17be
Last Changed Date: 2019-10-29 13:11:02 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Sconify
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/Sconify_1.6.0.tar.gz && rm -rf Sconify.buildbin-libdir && mkdir Sconify.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Sconify.buildbin-libdir Sconify_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL Sconify_1.6.0.zip && rm Sconify_1.6.0.tar.gz Sconify_1.6.0.zip
StartedAt: 2020-04-14 18:59:40 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:00:31 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 51.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/Sconify_1.6.0.tar.gz && rm -rf Sconify.buildbin-libdir && mkdir Sconify.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Sconify.buildbin-libdir Sconify_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL Sconify_1.6.0.zip && rm Sconify_1.6.0.tar.gz Sconify_1.6.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3906k  100 3906k    0     0  44.3M      0 --:--:-- --:--:-- --:--:-- 46.5M

install for i386

* installing *source* package 'Sconify' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Note: wrong number of arguments to '/' 
Note: wrong number of arguments to 'asinh' 
** help
*** installing help indices
  converting help for package 'Sconify'
    finding HTML links ... done
    AddTsne                                 html  
    FcsToTibble                             html  
    Fnn                                     html  
    GetKnnDe                                html  
    GetMarkerNames                          html  
    Impute                                  html  
    ImputeTesting                           html  
    LogTransformQ                           html  
    MakeHist                                html  
    MakeKnnList                             html  
    MeaningOfLife                           html  
    MultipleDonorStatistics                 html  
    ParseMarkers                            html  
    PostProcessing                          html  
    ProcessMultipleFiles                    html  
    QCorrectionThresholding                 html  
    QuantNormalize                          html  
    QuantNormalizeElements                  html  
    RunStatistics                           html  
    SconeValues                             html  
    SplitFile                               html  
    StringToNumbers                         html  
    SubsampleAndTsne                        html  
    TsneVis                                 html  
    bz.gmcsf.final                          html  
    bz.gmcsf.final.norm.scale               html  
    exist                                   html  
    funct.markers                           html  
    input.markers                           html  
    markers                                 html  
    wand.combined                           html  
    wand.final                              html  
    wand.ideal.k                            html  
    wand.il7                                html  
    wand.scone                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Sconify' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Sconify' as Sconify_1.6.0.zip
* DONE (Sconify)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'Sconify' successfully unpacked and MD5 sums checked