Back to Multiple platform build/check report for BioC 3.10
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

INSTALL report for RUVcorr on tokay1

This page was generated on 2020-04-15 12:24:46 -0400 (Wed, 15 Apr 2020).

Package 1500/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RUVcorr 1.18.0
Saskia Freytag
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/RUVcorr
Branch: RELEASE_3_10
Last Commit: 730fdd3
Last Changed Date: 2019-10-29 13:09:16 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: RUVcorr
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/RUVcorr_1.18.0.tar.gz && rm -rf RUVcorr.buildbin-libdir && mkdir RUVcorr.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RUVcorr.buildbin-libdir RUVcorr_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL RUVcorr_1.18.0.zip && rm RUVcorr_1.18.0.tar.gz RUVcorr_1.18.0.zip
StartedAt: 2020-04-14 19:07:30 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:08:16 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 45.5 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/RUVcorr_1.18.0.tar.gz && rm -rf RUVcorr.buildbin-libdir && mkdir RUVcorr.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RUVcorr.buildbin-libdir RUVcorr_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL RUVcorr_1.18.0.zip && rm RUVcorr_1.18.0.tar.gz RUVcorr_1.18.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1612k  100 1612k    0     0  9462k      0 --:--:-- --:--:-- --:--:-- 9655k

install for i386

* installing *source* package 'RUVcorr' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RUVcorr'
    finding HTML links ... done
    ECDFPlot                                html  
    PCAPlot                                 html  
    RLEPlot                                 html  
    RUVNaiveRidge                           html  
    RUVcorr                                 html  
    assessQuality                           html  
    background                              html  
    calculateThreshold                      html  
    compareRanks                            html  
    correlationPlot                         html  
    eigenvaluePlot                          html  
    empNegativeControls                     html  
    findIQR                                 html  
    findMinmaxSamples                       html  
    findWeights                             html  
    funcPara                                html  
    funcThresh                              html  
    genePlot                                html  
    histogramPlot                           html  
    is.optimizeParameters                   html  
    is.simulateGEdata                       html  
    makePosSemiDef                          html  
    makeRankedList                          html  
    mashUp                                  html  
    optimizeParameters                      html  
    plot.optimizeParameters                 html  
    plotDesign                              html  
    plotThreshold                           html  
    print.simulateGEdata                    html  
    prioritise                              html  
    simulateGEdata                          html  
    splitByFactor                           html  
    wcor                                    html  
** building package indices
** installing vignettes
   'RUVcorrVignetteNew.Rnw' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RUVcorr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RUVcorr' as RUVcorr_1.18.0.zip
* DONE (RUVcorr)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'RUVcorr' successfully unpacked and MD5 sums checked