Back to Multiple platform build/check report for BioC 3.10
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

INSTALL report for MSstatsTMT on tokay1

This page was generated on 2020-04-15 12:31:15 -0400 (Wed, 15 Apr 2020).

Package 1108/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSstatsTMT 1.4.6
Ting Huang
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/MSstatsTMT
Branch: RELEASE_3_10
Last Commit: c6193cc
Last Changed Date: 2020-04-14 08:15:57 -0400 (Tue, 14 Apr 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK YES, new version is higher than in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK YES, new version is higher than in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK YES, new version is higher than in internal repository

Summary

Package: MSstatsTMT
Version: 1.4.6
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/MSstatsTMT_1.4.6.tar.gz && rm -rf MSstatsTMT.buildbin-libdir && mkdir MSstatsTMT.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSstatsTMT.buildbin-libdir MSstatsTMT_1.4.6.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL MSstatsTMT_1.4.6.zip && rm MSstatsTMT_1.4.6.tar.gz MSstatsTMT_1.4.6.zip
StartedAt: 2020-04-14 20:27:28 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 20:27:50 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 22.7 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/MSstatsTMT_1.4.6.tar.gz && rm -rf MSstatsTMT.buildbin-libdir && mkdir MSstatsTMT.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSstatsTMT.buildbin-libdir MSstatsTMT_1.4.6.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL MSstatsTMT_1.4.6.zip && rm MSstatsTMT_1.4.6.tar.gz MSstatsTMT_1.4.6.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1351k  100 1351k    0     0  22.8M      0 --:--:-- --:--:-- --:--:-- 24.4M

install for i386

* installing *source* package 'MSstatsTMT' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MSstatsTMT'
    finding HTML links ... done
    MSstatsTMT                              html  
    MaxQtoMSstatsTMTFormat                  html  
    OpenMStoMSstatsTMTFormat                html  
    PDtoMSstatsTMTFormat                    html  
    SpectroMinetoMSstatsTMTFormat           html  
    annotation.mine                         html  
    annotation.mq                           html  
    annotation.pd                           html  
    dataProcessPlotsTMT                     html  
    evidence                                html  
    groupComparisonTMT                      html  
    input.pd                                html  
    proteinGroups                           html  
    proteinSummarization                    html  
    quant.pd.msstats                        html  
    raw.mine                                html  
    raw.om                                  html  
    raw.pd                                  html  
    test.pairwise                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MSstatsTMT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MSstatsTMT' as MSstatsTMT_1.4.6.zip
* DONE (MSstatsTMT)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'MSstatsTMT' successfully unpacked and MD5 sums checked