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BUILD BIN report for GeneNetworkBuilder on tokay1

This page was generated on 2020-04-15 12:20:54 -0400 (Wed, 15 Apr 2020).

Package 657/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneNetworkBuilder 1.28.1
Jianhong Ou
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/GeneNetworkBuilder
Branch: RELEASE_3_10
Last Commit: cbec4f6
Last Changed Date: 2020-01-18 16:27:39 -0400 (Sat, 18 Jan 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GeneNetworkBuilder
Version: 1.28.1
Command: rm -rf GeneNetworkBuilder.buildbin-libdir && mkdir GeneNetworkBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneNetworkBuilder.buildbin-libdir GeneNetworkBuilder_1.28.1.tar.gz
StartedAt: 2020-04-15 08:47:24 -0400 (Wed, 15 Apr 2020)
EndedAt: 2020-04-15 08:48:28 -0400 (Wed, 15 Apr 2020)
EllapsedTime: 64.3 seconds
RetCode: 0
Status:  OK  
PackageFile: GeneNetworkBuilder_1.28.1.zip
PackageFileSize: 7.758 MiB

Command output

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### Running command:
###
###   rm -rf GeneNetworkBuilder.buildbin-libdir && mkdir GeneNetworkBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneNetworkBuilder.buildbin-libdir GeneNetworkBuilder_1.28.1.tar.gz
###
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install for i386

* installing *source* package 'GeneNetworkBuilder' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c geneTree.cpp -o geneTree.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c nodefilter.cpp -o nodefilter.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o GeneNetworkBuilder.dll tmp.def geneTree.o nodefilter.o registerDynamicSymbol.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/GeneNetworkBuilder.buildbin-libdir/00LOCK-GeneNetworkBuilder/00new/GeneNetworkBuilder/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GeneNetworkBuilder'
    finding HTML links ... done
    GeneNetworkBuilder-package              html  
    browseNetwork-shiny                     html  
    browseNetwork                           html  
    buildNetwork                            html  
    ce.IDsMap                               html  
    ce.interactionmap                       html  
    ce.mapIDs                               html  
    ce.miRNA.map                            html  
    convertID                               html  
    example.data                            html  
    exportNetwork                           html  
    filterNetwork                           html  
    hs.IDsMap                               html  
    hs.interactionmap                       html  
    hs.mapIDs                               html  
    hs.miRNA.map                            html  
    networkFromGenes                        html  
    polishNetwork                           html  
    saveXGMML                               html  
    uniqueExprsData                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GeneNetworkBuilder' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c geneTree.cpp -o geneTree.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c nodefilter.cpp -o nodefilter.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o GeneNetworkBuilder.dll tmp.def geneTree.o nodefilter.o registerDynamicSymbol.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/GeneNetworkBuilder.buildbin-libdir/GeneNetworkBuilder/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneNetworkBuilder' as GeneNetworkBuilder_1.28.1.zip
* DONE (GeneNetworkBuilder)