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BioC 3.1: BUILD report for rTRM on zin2

This page was generated on 2015-10-09 09:25:34 -0700 (Fri, 09 Oct 2015).

Package 863/1024HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rTRM 1.6.0
Diego Diez
Snapshot Date: 2015-10-08 17:20:21 -0700 (Thu, 08 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_1/madman/Rpacks/rTRM
Last Changed Rev: 102591 / Revision: 109384
Last Changed Date: 2015-04-16 12:42:01 -0700 (Thu, 16 Apr 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK [ OK ] OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  ERROR  skipped  skipped 
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: rTRM
Version: 1.6.0
Command: /home/biocbuild/bbs-3.1-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rTRM
StartedAt: 2015-10-08 20:47:19 -0700 (Thu, 08 Oct 2015)
EndedAt: 2015-10-08 20:47:51 -0700 (Thu, 08 Oct 2015)
EllapsedTime: 32.3 seconds
RetCode: 0
Status:  OK 
PackageFile: rTRM_1.6.0.tar.gz
PackageFileSize: 2.973 MiB

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.1-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rTRM
###
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##############################################################################


* checking for file ‘rTRM/DESCRIPTION’ ... OK
* preparing ‘rTRM’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* building the PDF package manual
Hmm ... looks like a package
Converting Rd files to LaTeX Loading required package: igraph

Attaching package: ‘igraph’

The following objects are masked from ‘package:stats’:

    decompose, spectrum

The following object is masked from ‘package:base’:

    union

...
Creating pdf output from LaTeX ...

This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013/Debian)
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entering extended mode
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(./Rd2.tex (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
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lwd, edge.lty, label = TRUE, label.col, label.cex, label.pos = NULL, label.offs
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abel.cex, label.col, label.pos = NULL, label.offset = 1.5, adjust.label.col = F
ALSE, normalize.layout = TRUE)[] 
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lwd, edge.lty, label = TRUE, label.col, label.cex, label.pos = NULL, label.offs
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abel.cex, label.col, label.pos = NULL, label.offset = 1.5, adjust.label.col = F
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 )
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ist/fonts/enc/dvips/base/8r.enc}{/usr/share/texlive/texmf-dist/fonts/enc/dvips/
inconsolata/i4-t1-0.enc}</usr/share/texlive/texmf-dist/fonts/type1/public/incon
solata/Inconsolata-zi4r.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
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s/type1/urw/times/utmri8a.pfb>
Output written on Rd2.pdf (23 pages, 170088 bytes).
Transcript written on Rd2.log.
Saving output to ‘/tmp/RtmpqHW39s/Rbuild6f5542c06436/rTRM/build/rTRM.pdf’ ...
Done
* creating vignettes ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
* building ‘rTRM_1.6.0.tar.gz’