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BioC 3.1: BUILD BIN report for phyloseq on petty

This page was generated on 2015-10-09 09:34:56 -0700 (Fri, 09 Oct 2015).

Package 717/1024HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phyloseq 1.12.2
Paul J. McMurdie
Snapshot Date: 2015-10-08 17:20:21 -0700 (Thu, 08 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_1/madman/Rpacks/phyloseq
Last Changed Rev: 103100 / Revision: 109384
Last Changed Date: 2015-04-26 14:28:03 -0700 (Sun, 26 Apr 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: phyloseq
Version: 1.12.2
Command: rm -rf phyloseq.buildbin-libdir && mkdir phyloseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh phyloseq_1.12.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R phyloseq.buildbin-libdir
StartedAt: 2015-10-09 03:19:11 -0700 (Fri, 09 Oct 2015)
EndedAt: 2015-10-09 03:19:47 -0700 (Fri, 09 Oct 2015)
EllapsedTime: 36.1 seconds
RetCode: 0
Status:  OK 
PackageFile: phyloseq_1.12.2.tgz
PackageFileSize: 3.052 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf phyloseq.buildbin-libdir && mkdir phyloseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh phyloseq_1.12.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R phyloseq.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=phyloseq.buildbin-libdir phyloseq_1.12.2.tar.gz'
>>>>>>> 

* installing *source* package ‘phyloseq’ ...
** R
** data
** inst
** preparing package for lazy loading
Note: the specification for S3 class “AsIs” in package ‘RJSONIO’ seems equivalent to one from package ‘BiocGenerics’: not turning on duplicate class definitions for this class.
Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Note: the specification for S3 class “AsIs” in package ‘RJSONIO’ seems equivalent to one from package ‘BiocGenerics’: not turning on duplicate class definitions for this class.
Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’
* DONE (phyloseq)