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BioC 3.1: INSTALL report for SomaticSignatures on moscato2

This page was generated on 2015-10-09 09:30:55 -0700 (Fri, 09 Oct 2015).

Package 927/1024HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SomaticSignatures 2.4.8
Julian Gehring
Snapshot Date: 2015-10-08 17:20:21 -0700 (Thu, 08 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_1/madman/Rpacks/SomaticSignatures
Last Changed Rev: 108160 / Revision: 109384
Last Changed Date: 2015-09-04 05:27:08 -0700 (Fri, 04 Sep 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SomaticSignatures
Version: 2.4.8
Command: C:\cygwin\bin\curl.exe -O http://zin2/BBS/3.1/bioc/src/contrib/SomaticSignatures_2.4.8.tar.gz && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch SomaticSignatures_2.4.8.tar.gz && rm SomaticSignatures_2.4.8.tar.gz
StartedAt: 2015-10-08 19:04:02 -0700 (Thu, 08 Oct 2015)
EndedAt: 2015-10-08 19:05:04 -0700 (Thu, 08 Oct 2015)
EllapsedTime: 61.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://zin2/BBS/3.1/bioc/src/contrib/SomaticSignatures_2.4.8.tar.gz && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch SomaticSignatures_2.4.8.tar.gz && rm SomaticSignatures_2.4.8.tar.gz
###
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install for i386

* installing to library 'E:/biocbld/bbs-3.1-bioc/R/library'
* installing *source* package 'SomaticSignatures' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'nchar' from package 'base' in package 'S4Vectors'
Note: the specification for S3 class "cluster" in package 'NMF' seems equivalent to one from package 'BiocParallel': not turning on duplicate class definitions for this class.
** help
*** installing help indices
** building package indices
** installing vignettes
   'SomaticSignatures-vignette.Rhtml' 
** testing if installed package can be loaded
Creating a generic function for 'nchar' from package 'base' in package 'S4Vectors'
Note: the specification for S3 class "cluster" in package 'NMF' seems equivalent to one from package 'BiocParallel': not turning on duplicate class definitions for this class.

install for x64

* installing to library 'E:/biocbld/bbs-3.1-bioc/R/library'
* installing *source* package 'SomaticSignatures' ...
** testing if installed package can be loaded
Creating a generic function for 'nchar' from package 'base' in package 'S4Vectors'
Note: the specification for S3 class "cluster" in package 'NMF' seems equivalent to one from package 'BiocParallel': not turning on duplicate class definitions for this class.
* DONE (SomaticSignatures)