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BioC 3.0: BUILD BIN report for systemPipeR on moscato1

This page was generated on 2015-04-10 09:51:10 -0700 (Fri, 10 Apr 2015).

Package 879/933HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
systemPipeR 1.0.12
Thomas Girke
Snapshot Date: 2015-04-09 16:20:12 -0700 (Thu, 09 Apr 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_0/madman/Rpacks/systemPipeR
Last Changed Rev: 101073 / Revision: 102249
Last Changed Date: 2015-03-23 17:56:25 -0700 (Mon, 23 Mar 2015)
zin1 Linux (Ubuntu 12.04.4 LTS) / x86_64  NotNeeded  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK [ OK ]
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK 

Summary

Package: systemPipeR
Version: 1.0.12
Command: cd systemPipeR.buildbin-libdir/systemPipeR && zip -r ../../systemPipeR_1.0.12.zip . & cd ../..
StartedAt: 2015-04-10 07:35:06 -0700 (Fri, 10 Apr 2015)
EndedAt: 2015-04-10 07:35:20 -0700 (Fri, 10 Apr 2015)
EllapsedTime: 14.4 seconds
RetCode: 0
Status:  OK  
PackageFile: systemPipeR_1.0.12.zip
PackageFileSize: 3.938 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd systemPipeR.buildbin-libdir/systemPipeR && zip -r ../../systemPipeR_1.0.12.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: DESCRIPTION (188 bytes security) (deflated 43%)
  adding: doc/ (256 bytes security) (stored 0%)
  adding: doc/index.html (188 bytes security) (deflated 77%)
  adding: doc/systemPipeChIPseq.pdf (188 bytes security) (deflated 10%)
  adding: doc/systemPipeChIPseq.R (188 bytes security) (deflated 73%)
  adding: doc/systemPipeChIPseq.Rnw (188 bytes security) (deflated 58%)
  adding: doc/systemPipeR.pdf (188 bytes security) (deflated 15%)
  adding: doc/systemPipeR.R (188 bytes security) (deflated 76%)
  adding: doc/systemPipeR.Rnw (188 bytes security) (deflated 67%)
  adding: doc/systemPipeRNAseq.pdf (188 bytes security) (deflated 14%)
  adding: doc/systemPipeRNAseq.R (188 bytes security) (deflated 74%)
  adding: doc/systemPipeRNAseq.Rnw (188 bytes security) (deflated 64%)
  adding: doc/systemPipeVARseq.pdf (188 bytes security) (deflated 10%)
  adding: doc/systemPipeVARseq.R (188 bytes security) (deflated 77%)
  adding: doc/systemPipeVARseq.Rnw (188 bytes security) (deflated 60%)
  adding: extdata/ (256 bytes security) (stored 0%)
  adding: extdata/.BatchJobs.R (188 bytes security) (deflated 19%)
  adding: extdata/alignStats.xls (188 bytes security) (deflated 62%)
  adding: extdata/bowtiePE.param (188 bytes security) (deflated 42%)
  adding: extdata/bowtieSE.param (188 bytes security) (deflated 42%)
  adding: extdata/bwa.param (188 bytes security) (deflated 43%)
  adding: extdata/countDFeByg.xls (188 bytes security) (deflated 61%)
  adding: extdata/gatk.param (188 bytes security) (deflated 50%)
  adding: extdata/gatk_run.sh (188 bytes security) (deflated 56%)
  adding: extdata/rpkmDFeByg.xls (188 bytes security) (deflated 49%)
  adding: extdata/rsubread.param (188 bytes security) (deflated 43%)
  adding: extdata/sambcf.param (188 bytes security) (deflated 49%)
  adding: extdata/sambcf_run.sh (188 bytes security) (deflated 50%)
  adding: extdata/targets.txt (188 bytes security) (deflated 65%)
  adding: extdata/targetsPE.txt (188 bytes security) (deflated 70%)
  adding: extdata/tophat.param (188 bytes security) (deflated 42%)
  adding: extdata/torque.tmpl (188 bytes security) (deflated 49%)
  adding: extdata/trim.param (188 bytes security) (deflated 44%)
  adding: help/ (256 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 79%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: help/systemPipeR.rdb (188 bytes security) (deflated 1%)
  adding: help/systemPipeR.rdx (188 bytes security) (stored 0%)
  adding: html/ (256 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 87%)
  adding: html/R.css (188 bytes security) (deflated 70%)
  adding: INDEX (188 bytes security) (deflated 57%)
  adding: MD5 (188 bytes security) (deflated 51%)
  adding: Meta/ (256 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
  adding: Meta/links.rds (188 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 47%)
  adding: R/ (256 bytes security) (stored 0%)
  adding: R/systemPipeR (188 bytes security) (deflated 41%)
  adding: R/systemPipeR.rdb (188 bytes security) (deflated 18%)
  adding: R/systemPipeR.rdx (188 bytes security) (deflated 1%)
  adding: unitTests/ (256 bytes security) (stored 0%)
  adding: unitTests/SRR446027_1.fastq (188 bytes security) (stored 0%)
  adding: unitTests/SRR446028_1.fastq (188 bytes security) (stored 0%)
  adding: unitTests/SRR446029_1.fastq (188 bytes security) (stored 0%)
  adding: unitTests/SRR446030_1.fastq (188 bytes security) (stored 0%)
  adding: unitTests/targets.txt (188 bytes security) (deflated 39%)
  adding: unitTests/test_classes.R (188 bytes security) (deflated 32%)
  adding: unitTests/tophat.param (188 bytes security) (deflated 42%)