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Package 216/436HostnameOS / ArchBUILDCHECKBUILD BIN
IPPD 0.99.1
Martin Slawski
Snapshot Date: 2011-02-24 11:26:35 -0800 (Thu, 24 Feb 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/IPPD
Last Changed Rev: 51893 / Revision: 53255
Last Changed Date: 2011-01-13 01:45:00 -0800 (Thu, 13 Jan 2011)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.4) / i386  OK  OK [ OK ]

Summary

Package: IPPD
Version: 0.99.1
Command: /Users/biocbuild/BBS/utils/build-universal.sh IPPD_0.99.1.tar.gz /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R IPPD.buildbin-libdir
StartedAt: 2011-02-24 17:20:51 -0800 (Thu, 24 Feb 2011)
EndedAt: 2011-02-24 17:20:58 -0800 (Thu, 24 Feb 2011)
EllapsedTime: 7.1 seconds
RetCode: 0
Status:  OK 
PackageFile: IPPD_0.99.1.tgz
PackageFileSize: 2.002 MiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=IPPD.buildbin-libdir IPPD_0.99.1.tar.gz'
>>>>>>> 

* installing *source* package 'IPPD' ...
** libs
*** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c R_init_IPPD.c -o R_init_IPPD.o
R_init_IPPD.c:29: warning: missing braces around initializer
R_init_IPPD.c:29: warning: (near initialization for 'cmethods[10]')
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o IPPD.so R_init_IPPD.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/IPPD.buildbin-libdir/IPPD/libs/i386
*** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c R_init_IPPD.c -o R_init_IPPD.o
R_init_IPPD.c:29: warning: missing braces around initializer
R_init_IPPD.c:29: warning: (near initialization for 'cmethods[10]')
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o IPPD.so R_init_IPPD.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/IPPD.buildbin-libdir/IPPD/libs/ppc
*** arch - x86_64
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/x86_64  -I/usr/local/include    -fPIC  -g -O2 -Wall -pedantic -c R_init_IPPD.c -o R_init_IPPD.o
R_init_IPPD.c:29: warning: missing braces around initializer
R_init_IPPD.c:29: warning: (near initialization for 'cmethods[10]')
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o IPPD.so R_init_IPPD.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/IPPD.buildbin-libdir/IPPD/libs/x86_64
** R
** data
** inst
** preparing package for lazy loading
Loading required package: lattice

Attaching package: 'Matrix'

The following object(s) are masked from 'package:base':

    det

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (IPPD)


>>>>>>> 
>>>>>>> FIXING LINKS FOR IPPD.buildbin-libdir/IPPD/libs/i386/IPPD.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "IPPD.buildbin-libdir/IPPD/libs/i386/IPPD.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "IPPD.buildbin-libdir/IPPD/libs/i386/IPPD.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "IPPD.buildbin-libdir/IPPD/libs/i386/IPPD.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "IPPD.buildbin-libdir/IPPD/libs/i386/IPPD.so"


>>>>>>> 
>>>>>>> FIXING LINKS FOR IPPD.buildbin-libdir/IPPD/libs/ppc/IPPD.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "IPPD.buildbin-libdir/IPPD/libs/ppc/IPPD.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "IPPD.buildbin-libdir/IPPD/libs/ppc/IPPD.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "IPPD.buildbin-libdir/IPPD/libs/ppc/IPPD.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "IPPD.buildbin-libdir/IPPD/libs/ppc/IPPD.so"


>>>>>>> 
>>>>>>> FIXING LINKS FOR IPPD.buildbin-libdir/IPPD/libs/x86_64/IPPD.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "IPPD.buildbin-libdir/IPPD/libs/x86_64/IPPD.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "IPPD.buildbin-libdir/IPPD/libs/x86_64/IPPD.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "IPPD.buildbin-libdir/IPPD/libs/x86_64/IPPD.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "IPPD.buildbin-libdir/IPPD/libs/x86_64/IPPD.so"