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Package 408/419HostnameOS / ArchBUILDCHECKBUILD BIN
VanillaICE 1.12.4
Robert Scharpf
Snapshot Date: 2011-04-06 23:24:01 -0700 (Wed, 06 Apr 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/VanillaICE
Last Changed Rev: 51962 / Revision: 54588
Last Changed Date: 2011-01-18 17:50:31 -0800 (Tue, 18 Jan 2011)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK [ OK ]

Summary

Package: VanillaICE
Version: 1.12.4
Command: D:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD INSTALL --build --library=VanillaICE.buildbin-libdir VanillaICE_1.12.4.tar.gz
StartedAt: 2011-04-07 14:24:25 -0700 (Thu, 07 Apr 2011)
EndedAt: 2011-04-07 14:24:39 -0700 (Thu, 07 Apr 2011)
EllapsedTime: 13.4 seconds
RetCode: 0
Status:  OK  
PackageFile: VanillaICE_1.12.4.zip
PackageFileSize: 2.013 MiB

Command output

* installing *source* package 'VanillaICE' ...

  Using auto-selected zip option '--use-zip-data'

** libs
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.7-bioc/R/include"         -O2 -Wall  -std=gnu99 -c viterbi.c -o viterbi.o
viterbi.c: In function 'viterbi':
viterbi.c:61:34: warning: unused variable 'tp'
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o VanillaICE.dll tmp.def viterbi.o -lm -LD:/biocbld/bbs-2.7-bioc/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.7-bioc/meat/VanillaICE.buildbin-libdir/VanillaICE/libs/x64
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: oligoClasses
================================================================================
Welcome to oligoClasses version 1.12.2
================================================================================
Large dataset support for 'oligo/crlmm': Disabled
     - Load 'ff'
================================================================================
Parallel computing support for 'oligo/crlmm': Disabled
     - Load 'ff'
     - Load 'snow'
     - Use options(cluster=makeCluster(...))
================================================================================
Loading package bit1.1-6

package:bit (c) 2008/2009 Jens Oehlschlaegel (GPL-2)

creators: bit bitwhich

coercion: as.logical as.integer as.bit as.bitwhich which

operator: ! & | xor != == 

querying: print length any all min max range sum summary

bit access: length<- [ [<- [[ [[<-

for more help type ?bit

Loading package ff2.2-1

- getOption("fftempdir")=="D:/biocbld/bbs-2.7-bioc/tmpdir/Rtmprc6hAb"

- getOption("ffextension")=="ff"

- getOption("ffdrop")==TRUE

- getOption("fffinonexit")==TRUE

- getOption("ffpagesize")==65536

- getOption("ffcaching")=="mmnoflush"  -- consider "ffeachflush" if your system stalls on large writes

- getOption("ffbatchbytes")==42928701.44 -- consider a different value for tuning your system

- getOption("ffmaxbytes")==2146435072 -- consider a different value for tuning your system

Welcome to crlmm version 1.8.11

Attaching package: 'IRanges'

The following object(s) are masked from 'package:Biobase':

    updateObject

The following object(s) are masked from 'package:base':

    Map, cbind, eval, mapply, order, paste, pmax, pmax.int, pmin,
    pmin.int, rbind, rep.int, table

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Welcome to VanillaICE version 1.12.4
* MD5 sums
packaged installation of 'VanillaICE' as VanillaICE_1.12.4.zip

* DONE (VanillaICE)